Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1028 |
Symbol | |
ID | 4616827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 927761 |
End bp | 928960 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639784125 |
Product | GntR family transcriptional regulator |
Protein accession | YP_930545 |
Protein GI | 119872538 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000000000000302984 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGTAG ATAGTATACT TGCGTCGCGC ACAAAATTTA TGACTGCAAG TGAAATAAGA GAGTTGCTCA AATGGATAAC CTCCGACGTT ATATCTTTTG GAGGTGGACT ACCTGATCCC TCCACATTTC CCGTTGACGA AATTTCTAAA GTAGTAGCGT ACGTGTTAGA GGCCTATCCG CAAAGAGCGT TACAATACGG CTCTACCGAG GGTGTCGCAG AACTCCGCGA AGAACTTGCT AAGTTTGTAG ACTCTTACGC CGGCATTAAG GCAAGACCGG AAAATGTATT TATCACAGTA GGTAGCCAAG AGGCTCTTGA GCTCTTGGGG CGTGTGTTTA TAGACCAAGG AGATGTAATT ATTACAGAAA ACCCCACATA TATAGCAGCG TTACAAGCGT GGAGAGTATA CCAGCCGAGG TTAATTGGCA TACCAATGGA CGAACATGGC ATGGTTGTAG AGAAACTGGA GGATACAATC AGAAAACTCA AGGCAGAGGG CGCTAAAATA AAGTTTATCT ACACAATCCC AACGGCACAA AACCCCAGCG GCTTAACAAT GTCTCAAGAG AGAAGAAAAT ATCTTCTTGA GATTGCTGAA AAATATGATC TGTTGATAGT GGAGGACGAC CCATATTCCT ACTTTCTCTT CGAGCCTATA CAAGTTACGC CTATTAAGAC ACTAGACAGA TCAGGAAGGG TGATATATCT CTCTACTGCA TCTAAGATAT TCGCGCCTGG CTTCCGTTTG GGCTGGGTTA TAGCAGATAA GGAAATCCTA GATTGGTTTA ATCTAGCTAA ACAATCCTTA AATCTACACA CTTCTACATT TGCACAATAC GTACTCCTAG AGGGGCTCAG ACGCAATATA ATCTTAAAGA ATCTGCCACG CGTAAAAGAA CTTTATAGAC GGAAACGCGA CGCCATGCTA ACCGCATTAG AGACTTATAT GCCGCCTGGT GTAAGTTGGA CGAAACCAAG CGGCGGCATG TTTATATGGG CCACCGTGCC GCCACATATA GATACGAGGG AGTTGCTAGT CACTGCAATC ACTAAATATA AGGTGGCTTT TGTGCCAGGC CACGGCTTCT CTGTGGATCA ATCGCTTACA AACGCTATGC GTTTAAATTT CACCTATCCA ACTTTCGAAC AAATTGAAGA GGGCATCCGC CGTCTTGCAA TGGCAATAAA AAGTGCATGA
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Protein sequence | MKVDSILASR TKFMTASEIR ELLKWITSDV ISFGGGLPDP STFPVDEISK VVAYVLEAYP QRALQYGSTE GVAELREELA KFVDSYAGIK ARPENVFITV GSQEALELLG RVFIDQGDVI ITENPTYIAA LQAWRVYQPR LIGIPMDEHG MVVEKLEDTI RKLKAEGAKI KFIYTIPTAQ NPSGLTMSQE RRKYLLEIAE KYDLLIVEDD PYSYFLFEPI QVTPIKTLDR SGRVIYLSTA SKIFAPGFRL GWVIADKEIL DWFNLAKQSL NLHTSTFAQY VLLEGLRRNI ILKNLPRVKE LYRRKRDAML TALETYMPPG VSWTKPSGGM FIWATVPPHI DTRELLVTAI TKYKVAFVPG HGFSVDQSLT NAMRLNFTYP TFEQIEEGIR RLAMAIKSA
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