| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1005 |
|---|
| Symbol | |
|---|
| ID | 4617130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 903156 |
|---|
| End bp | 903821 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639784102 |
|---|
| Product | AMMECR1 domain-containing protein |
|---|
| Protein accession | YP_930522 |
|---|
| Protein GI | 119872515 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2078] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.320015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0000637558 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCGCC CATACACAAT AGAAGAGGGG GCCTATCTAG TCAAACTCGC AAGATCAACT
GTAGAAACAT TTCTCAAAAC GGGCAAGATA ATAATCCCAG AGAGCCCGCC ACAAAGACTT
CTTATAGATA ACTATGGGGT ATTTACAACA ATAGAAACGG TCTCGGGCGA TAGATATGAG
CTACGCGGAT GTATAGGATA TCCAGAGGGA TATAAAAATA CACTATATGC AACTATCTAC
AGCGCCATAG GCGCGTGTTG TCAAGATCCA CGCTTCCCAG CCCTACGCAT AGACGAACTC
CCCCATGTAA TATTTGAAGT GAGCATTTTA AGTCCATTGA CCCTTCTACA AGACGACCCT
AGGAAATACC CAGAGCTTAT TCAAGTAGGC CGTCACGGCT TAGTTGTCAG AAGAGGCCCC
TATGCTGGTT TATTACTACC TCAAGTAGCT GTAGAAGAGT GTTGGGACGC AGAAGAGTTT
TTATTACATG TATGTATGAA GGCGTGGTTG CCTGGCGATT GTTGGCTAGA CCGTAGAACT
AAGCTCTATA TATACGAGGC GCAGATATTC CGCGAAAAAA CGCCTGGCGG CGAAATATAC
GAGCGTAACC TCGTCGCCGA AACTGCTAAA TGTAGTCCAA AAACTCGTAG AGAAAACGAA
CAGTAA
|
|---|
| Protein sequence | MFRPYTIEEG AYLVKLARST VETFLKTGKI IIPESPPQRL LIDNYGVFTT IETVSGDRYE
LRGCIGYPEG YKNTLYATIY SAIGACCQDP RFPALRIDEL PHVIFEVSIL SPLTLLQDDP
RKYPELIQVG RHGLVVRRGP YAGLLLPQVA VEECWDAEEF LLHVCMKAWL PGDCWLDRRT
KLYIYEAQIF REKTPGGEIY ERNLVAETAK CSPKTRRENE Q
|
|---|
| |