| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0985 |
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| Symbol | |
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| ID | 4618334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 882100 |
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| End bp | 885084 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639784083 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_930503 |
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| Protein GI | 119872496 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.369995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.376092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACT ACATGAGGCG GATAATTTTG TTTCTAGTCT TAGCTTTATT TCTGTTAGCC
CAGCCAATGA ATATAATATT TGTATTTCAT AACCACCAGC CTTGGTATAT AGACCTAGAA
AAAGGCGAGT TACTACTGCC ATGGGTGAGA ATACATTCTG TTGGAAATTA TCTAAAAGTG
CCCCTTCTTG TAAACCAAAG CGGCGTTTCC GTTGCATATA CTCTTTCTGG GAGTTTAATT
GAACAGATAA ATTGGTACGC TAACAGAACT TACGTCGACG CTAGATATAA GATATCGCAA
AAGATCGCAG AGGGGAAGCC TTTGACTCTG GAGGAGAAAT ACTCCATGTT GTTAGTGCCC
GGGGGATTCT TTGATATAAA TTGGCAAAAT ATTGTGTATA AACACCCAAG ATACACTGTA
TTGTTAGGGA TAAGAAATGA TGCATTTAGT AAATGTCCAC CTGGAAATAT AACATGCATC
GTATCTAGGT TCAGCGAGCA AGACTTTATT GACCTAGCCA CGCTTTTTAA CCTTCTCTGG
ATAGACCCAT ACATAGCACG ACAATACCCA GACGTTTGGG CTATGAGAAA TAAAACCTCC
TTTACGCGCA ACGACCTTAA GAGAGTCTTA GAGGTACACA TGGACCTAAT CTCAAAAGTT
TTGCCTTTAT ATAGAGCTTT GGCACAACAG AAGAGGGTAG AGCTCGTGCT AGTGCCATAC
TCACATCCTC TAATGCCTCT TTTGGCAGAC ATGGGAGCTT TAGAAGACTT AAAAGTTCAC
ATAAGACTCT CGCAGAATCT CTTTGAAAGA TATTTAGGAG TTTCGCCCAC GGGTGTTTGG
CCTCCTGAAC AAGCAGTTAA CGATGATGTG CTCAGACTTT TTACAGAATC CGGCTTTTTA
TGGACTATAA CAGACGAGGA CGTATTGAAG GCAACCATGC CCGGAGCTAG CCACTTCGGT
CTTTACTATG TAGATTATGG AGGACGACGT ATATACGTTT TCTTTAGAGA TAAAACACTG
TCTGACGGCC TAGGTTTTAG ATACGCCTCT ATGAAGCCAG AAGAGGCCTT GGCCGACTTT
ATGAATTATC TAAAGAGGGT GCCACGAGAC GAGTGTTCAG TAGTCGTAGT TGCATTAGAT
GGCGAAAATC CGTGGGAAAA CTATCCAAAT TTTGGAGATG ATTTTCTTAT TAAATTCTTT
GGAGGACTCG CACAGTTGGA GAAAAACGGC ACCATCAAGC TATGGAAACC TACAGACTTT
GTAAAGAGAT GTAGCGAAAA AGCTACGCCA TTACCACAAC GTGAATTTGA ATATTTCAAC
CTAAAAGTAG ATATATCCGT ATATACCTCT ATACGTGATC TACCAACCCG TATTGTCCAG
GGTAGAATTG CAGAAGGCTC GTGGTCTAGT GGGGGTAGTT TAGCCATTTG GATTGGCGAT
GTAGACGAAA ATGTTTGGTG GATGTGGCTA AAGAAGGCTA GAGAAGATGT AGGTCTAAAT
TTGAAGTGGG ATGTACTTTT CCCATTGTTA GTAGCTGAAG CCAGTGACTG GCCGTTTTGG
TACGGCGGCG AAATGGGTTC ACCACAGACC TTTGACCCTG TTGCAAAATC TGCACTGATA
GCATTTTACC GACGGGCTGG TTTACAGCCG CCTATGTATC TTTTCTCCTT GGCGTATCCC
GGCGGGACTC CCCGCGAAAT AGTTGGAAGG GGCGATGGAA AAGTAGCTCT CTACGAAGGG
CTTACGGTTT ATGTAAATAC GACACATATA TGGATAGAGG GCGCGGGGTG TGGCGTAGTC
TATTTCTCAA ATCCAACACT TCCGAGGTCG CCATATTTCT TCAGAGGCGC TGTATATGGA
ATACATGGCG AGAAATTACA CATATATGCC GATATGGCTA TCGATAGCTG TAATAACACA
GTATATCTCT CAGACGGCGG TAAGTTCTAT CCAGTTGGGA AAGCGGCTAG ATCGTACTTT
ATAGGCGCGC AACCTGGCGA CAAACTCTAC GTAGAGTTTA ATGGCCTTGT ATATGTGCTC
ACAATACCTG AAAGCCCAGT ACAACAAAAA TTGTTAATGG AAGTAGCTGA TCCGCCTGGA
GACGACTTTG GCACTGGTAA ATACCGCTAT CCTAAGAACC CCGTCTTCAA GCCCGGGGTT
TTTGACCTAT TAGGATTTAC GCTATACGAC CTGGGCGATA GGCTAAGGTT CATGTTTAGA
GTGAGAGAAT TTGGTGGAAA CCCATGGAGC GGGCCTGCAG GATTTTCGTT ACAGTTTTTC
CACGTCTATA TTAATAGAGG ACGTGGAGAG AGAAATGACA CACTTGGTCT AGGAGTGACT
CTTTGTAAAG AGGCGATGTG GGATGTGGCC TTATTAATAG GCCCTGGTTG GAGCGGCGGT
AATCGTATAG TTTATTCAGA TGGCTCATTT ATAGATGATG CTATGGCTAT AAGGCCAGGC
CCTAATAATA CAATTGTCGC AGATGTTCCC AAGAAGTACA TTGGCGAGTT TGAAAAAAGT
TGGAAATTAA CTGTGTTTCT CACATCGTGG GACGGCTACG GCCCAGACAA TATACGGAGA
TTTGGCGTAG TAGAAGATGA GTGGACTGTC GGCGGCGCAG ATGCCGCCGC GGTGTTGGCA
GGAGTGGCCC CGAGAGTGTT TGATGTGTTA GCGCCTACTG TAGATGCCCA GGTTAGGGCA
CTAACTTCCT ACAAAGTGTC CAGACTGCCT AATGGCACAT ACGTAGGCGC ACCAGCCTCT
GTGTGTATAT TTTACACACA AGAAAAGCCA GCCGCGACAA TTACTGCAAC AATCACCACT
ACAGTAACAC AGACAAGCCG TGAGACAGTT ACTACAACAC AGTACTTAAC GGAAACTCAG
AAAGAAACTG TAAGAGAAGT TAATTGGGTA GCTACAGCTA TAGTCTCAGT GTTAGCTTTT
ATACTTGGTT TAACACCTAG CCTATTGGCA AAAAGAGAGC GGTAA
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| Protein sequence | MAYYMRRIIL FLVLALFLLA QPMNIIFVFH NHQPWYIDLE KGELLLPWVR IHSVGNYLKV
PLLVNQSGVS VAYTLSGSLI EQINWYANRT YVDARYKISQ KIAEGKPLTL EEKYSMLLVP
GGFFDINWQN IVYKHPRYTV LLGIRNDAFS KCPPGNITCI VSRFSEQDFI DLATLFNLLW
IDPYIARQYP DVWAMRNKTS FTRNDLKRVL EVHMDLISKV LPLYRALAQQ KRVELVLVPY
SHPLMPLLAD MGALEDLKVH IRLSQNLFER YLGVSPTGVW PPEQAVNDDV LRLFTESGFL
WTITDEDVLK ATMPGASHFG LYYVDYGGRR IYVFFRDKTL SDGLGFRYAS MKPEEALADF
MNYLKRVPRD ECSVVVVALD GENPWENYPN FGDDFLIKFF GGLAQLEKNG TIKLWKPTDF
VKRCSEKATP LPQREFEYFN LKVDISVYTS IRDLPTRIVQ GRIAEGSWSS GGSLAIWIGD
VDENVWWMWL KKAREDVGLN LKWDVLFPLL VAEASDWPFW YGGEMGSPQT FDPVAKSALI
AFYRRAGLQP PMYLFSLAYP GGTPREIVGR GDGKVALYEG LTVYVNTTHI WIEGAGCGVV
YFSNPTLPRS PYFFRGAVYG IHGEKLHIYA DMAIDSCNNT VYLSDGGKFY PVGKAARSYF
IGAQPGDKLY VEFNGLVYVL TIPESPVQQK LLMEVADPPG DDFGTGKYRY PKNPVFKPGV
FDLLGFTLYD LGDRLRFMFR VREFGGNPWS GPAGFSLQFF HVYINRGRGE RNDTLGLGVT
LCKEAMWDVA LLIGPGWSGG NRIVYSDGSF IDDAMAIRPG PNNTIVADVP KKYIGEFEKS
WKLTVFLTSW DGYGPDNIRR FGVVEDEWTV GGADAAAVLA GVAPRVFDVL APTVDAQVRA
LTSYKVSRLP NGTYVGAPAS VCIFYTQEKP AATITATITT TVTQTSRETV TTTQYLTETQ
KETVREVNWV ATAIVSVLAF ILGLTPSLLA KRER
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