| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0973 |
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| Symbol | |
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| ID | 4616309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 870907 |
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| End bp | 871851 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639784072 |
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| Product | putative mRNA 3-end processing factor |
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| Protein accession | YP_930492 |
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| Protein GI | 119872485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.289039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATTT ACTACGACAG CGGTATATAT GTTGAAGGCC GTAAAACTAG GTTTGTTGTA
GATCCAACAG GGCCGATAAA GAGAGATGTA GATTTTGTAT TAGTTACACA TGGTCATAGC
GACCATATAT CTCGTTATGT CTTAAGACAG TTGGTAGTCG CAACTCAAGA AACTTTCGTT
GCCATGTATA TCCGTTTGGG CAGTCTACCT ACAAGGCGTA TAACTGTCGC ACCAGGCAAA
TTCTTAGAGT TAGACGGTGT ACATATAGCA GTGTTAGAGG CAGGACATAT ATTGGGCAGT
GTTATGTATC TTGTAGAGAT AGACGATTTA CAAGTGCTTT TTACAGGCGA TTTCAATACC
ACAGGCACAA TTTTAACAGA TGCAGCTGAG CCCGTGGATA AGCCAGATAT ACTCGTCATG
GACGCCACAT ATGGAGACCC AGCCTATATA TTTCCAAATA GAGCCGAGGT ATACAATGAG
TTACTAGATG TAGTTGAGAG ATATACTACT AGCGGCAAAG TGGCTATAGT CGCATATCCG
TTAGGCAAAG CACAGGAAGT CGCAAAGTTA TTTGGAACCA GAGCTGGAGC ACACATCACG
GTGGCAAGAT ATAATAGAGC CTTAGGTATT CCAACTGGCA TGGAAAAAAA TGTGGTAATA
GTACCAAGCC TAAGGTCTGC GCCAACTGGG TATTTCAAGG TAGAGGTTAG TGGTTGGTAT
GCAGAAGAAA CTACAAAGAG AGAAGCAGCT AAAAGGGGAG TATATGGAAT CCCTTTAAGC
GACCATAGCG ATTTTCCCAG CCTAGTGGAA TTTGTAACAG AGACGTCTCC TAAATTAATA
TATACCGTTT ATGGCTTCAC GGAGAGATTT GCAAAACATC TTAGAAGACT TGGTTATAGG
GCGTATACAA TACCTGGCAT TATGGGACTT GCGAAATTTT TCTAA
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| Protein sequence | MNIYYDSGIY VEGRKTRFVV DPTGPIKRDV DFVLVTHGHS DHISRYVLRQ LVVATQETFV
AMYIRLGSLP TRRITVAPGK FLELDGVHIA VLEAGHILGS VMYLVEIDDL QVLFTGDFNT
TGTILTDAAE PVDKPDILVM DATYGDPAYI FPNRAEVYNE LLDVVERYTT SGKVAIVAYP
LGKAQEVAKL FGTRAGAHIT VARYNRALGI PTGMEKNVVI VPSLRSAPTG YFKVEVSGWY
AEETTKREAA KRGVYGIPLS DHSDFPSLVE FVTETSPKLI YTVYGFTERF AKHLRRLGYR
AYTIPGIMGL AKFF
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