| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0928 |
|---|
| Symbol | |
|---|
| ID | 4616743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 825660 |
|---|
| End bp | 826739 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639784026 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_930447 |
|---|
| Protein GI | 119872440 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.20613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAGA GTGGCATTAT TTTAGCCGGT GGTTTTGCCA CTAGATTGAG ACCGCTCAGT
TATACAAAGC CTAAACCGCT TTTCCCCGTC CTGGGGAGGC CCGTGCTTGA CTGGGTAATT
GAGAAAGTTG CCGAAGTTAC AGAGCCTGTG ATATCTGCAA GATATCTGTC TAACATAATC
AAAAACTACG TGGCCGCCAG ATGGGGAGAT AGAGTGAGAG TTATAGAGGA GGATAAGCCG
TTGGGCGATG GCGGTGCTGT TATAAATGTA GTTAAAAGTC TCGGCTTAAG AGGCCCTATT
ATTGTGGCTA ATGGCGATGT TTTTACAGAC CTCTCTGTAA AAAGCCTATG GGAATATCAT
AAGAGGTCTG GCGCCGCGGT GACTATAGCA CTAATTGAGG TACCTCCCGA TGAAATAAGC
AGATTTGGCA TAGCGGTATT AGATGAGAGA GGCCACATCA AGAGATTTGT AGAGAAGCCC
AGAGAGCCTA TTGGAAGCAA CTTAGCTAAT GCCGGCTTTT ACATCTTCGA GCCCGAGGCA
GTGAAAGAAT TTCCCGAGTC AAACTCCGGA GAGGTGAAAA TAGCCAAACA CATAATTCCA
CGCCTCATGG AAAAATTCGA CATATATGGT TATATACACC GGGGGTTGTG GTTTGACATT
GGAACTTACA ACGACTATCT AAAGGCTAAT TTCGCAGCGC TTGACAATTG TAAATTCTGT
AGTCCAGAGG TGCCCGGTGT GAAAATTATA CCGCCTGTCT ATATGGGAGA AGGCGTTGTA
ATAGGGCCTG GAAGCGTGAT AGGGCCTTAC GCAGTTATTG GAGCCAGGAG TAAGTTAGGG
CCCTATGTCC GTGTTAAGGA AAGTGTTCTA ATGGAGGGGG TTGTGGCCGA AGCGGGGGCG
TATATCTACC GCTCTATTGT AGGTGAAGGC GTTGTTTTAG GCAAGTGGGT GCGCTTAATA
GAGGCTGTAG TAGCGGACGG CGTTTATGTC AAAGACGAAG TATATGTAGG CCGGGGCGCT
GCGGTGGGGC CGAATAGAGA GGTAGAACAG GATGTAAAAG ATGGAGAGAT TTTACCCTAG
|
|---|
| Protein sequence | MAESGIILAG GFATRLRPLS YTKPKPLFPV LGRPVLDWVI EKVAEVTEPV ISARYLSNII
KNYVAARWGD RVRVIEEDKP LGDGGAVINV VKSLGLRGPI IVANGDVFTD LSVKSLWEYH
KRSGAAVTIA LIEVPPDEIS RFGIAVLDER GHIKRFVEKP REPIGSNLAN AGFYIFEPEA
VKEFPESNSG EVKIAKHIIP RLMEKFDIYG YIHRGLWFDI GTYNDYLKAN FAALDNCKFC
SPEVPGVKII PPVYMGEGVV IGPGSVIGPY AVIGARSKLG PYVRVKESVL MEGVVAEAGA
YIYRSIVGEG VVLGKWVRLI EAVVADGVYV KDEVYVGRGA AVGPNREVEQ DVKDGEILP
|
|---|
| |