Gene Pisl_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0895 
Symbol 
ID4617190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp798969 
End bp800726 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content45% 
IMG OID639783991 
Productglycyl-tRNA synthetase 
Protein accessionYP_930414 
Protein GI119872407 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACG CTGAGATACT AGAGGAAATA GTAAAAAGGC GGCTTTTATA CTGGCCGTCG 
TCTGAAATCT ATGGAGGCGT CAGCGGATTT TACGACTACG GCCCTCTCGC AGTTCAACTT
AGACGTAACA TTATTGATAA GTGGAGAAGG ACTTTTGTCA CTCCTTATCA GGACCTTATT
ATAGAAGTAG AGACGCCAAT TATAATGCCC GAGCTTGTTT TTAAGGCGTC TGGACACTTA
GACCATTTTA CAGACTATGT AGTGACGTGT ACAAAATGTG GCAGGAAGTA TAGAGCTGAC
CATTTAGTAG AGGAGGAGCT GGCGAAAAAG GGAATAAAGA TATCTACCGA GGGCCTCTCT
ACGCCCGAGC TACAACGTCT AATAGAGGAG TATAGGATCG TGTGTCCGGC ATGTGGAGGG
CCGCTAGGCC ATGTGGAGAG ATTTAACCTA TTGTTTAAAA CCACTATAGG TCCCTATAGT
GAAAACGTCG GATATTTAAG GCCGGAGACT GCACAAGGAA TTTTCGTGGC TTTCCCACGC
CTGGCTGAAT ACGTTGGTCG TAGACACCCG TTTGGAGTTG CACAAATTGG TAGAGTGGCG
AGAAACGAAA TATCGCCAAG AGGCGGCTTA GTGAGACTAA GAGAATTTAC ACAGATGGAG
ATAGAGCTAT TCTTTGATCC ACAAAATCCT AAATGTCCCT ATTTTTCAGA TGTGGAAAAC
CTAGAAGTAC CAATTGTTCC AGAGGAGTTT GTAGCTAAGG GCCGTACAGA GCCTCTATAT
CTCACAGCAA AACAGATAGT AGAACGCGGC TACGCTAACG AGTGGATGGC CTTTTTCATG
GCTCTTGCAA CAAAGTTTCT AAAAGAATTA GGCGTCCCGG TAGAGAGACA GAAGTTCTTA
GGCAAGCTAC CCCACGAGCG AGCCCACTAC TCAGCCAAGT CTTACGACCA GATGGTTCTC
ACAGAGAGAT TCGGCTGGAT AGAAGTGTCA GGACACGCCT ACCGTACAGA CTACGACCTC
TCTGGCCATA GTAAATACAG CGGACAGGAG CTAGTCTTGG AGAGACGGCT TCCAACGCCG
AGAGAAGTAG AAGTAGCCCG GCTCTATCCA AATCCAGTAG CAATAAGAGA GAAATATGGT
GAAAAGACCG GCGAGGTAAT CAAAGCGTTA AAAGAAAATG AAAATATGGT ATTAGAGGCT
TTTAGAACAG GAAGACAAGA GGTTGTCCTA GGTCAGTATG TGATTACACG TGACATGGTC
TTCATAAAGA TTGAGAAGAG AAAGACAGAT ATAGAGAAAT TCGTACCACA CGTCGTAGAG
CCATCCTTTG GTCTTGACAG AATTCTCTAC GTAGTTTTAG AACACGCCGT AGCTATAGAA
AATGGAAGAG TATATCTAAG GCTACCTCCC GACATAGCGC CAGTGGCTGT ATGTATCTTG
CCCATTGTAA AGAGGGCAGA CTATGTTGAA ATAGGGAGGA GGCTAATGCG GAGATTGGGA
GACGAGGGGT TTACAGTCAT ATATGAAGAC GAGGGTACGA TAGGCAGTAG ATACGCCTAT
TGTGATGAAA TTGGTACCCC CTTGGCTGTT ACTATAGATG AAAAAACTCC AGTTGATGAG
ACAGTTACAA TTCGCGACCG CGATACCAAG AGACAAGTAA GAATAAAATT GGAGAAAGTT
CCCACTTTTG TCGCAATGGT TAAAAGAGGT ATGACATTTC AAGATGTTGC AGAGACGCTG
GGAGCACACC CAGTATAA
 
Protein sequence
MRNAEILEEI VKRRLLYWPS SEIYGGVSGF YDYGPLAVQL RRNIIDKWRR TFVTPYQDLI 
IEVETPIIMP ELVFKASGHL DHFTDYVVTC TKCGRKYRAD HLVEEELAKK GIKISTEGLS
TPELQRLIEE YRIVCPACGG PLGHVERFNL LFKTTIGPYS ENVGYLRPET AQGIFVAFPR
LAEYVGRRHP FGVAQIGRVA RNEISPRGGL VRLREFTQME IELFFDPQNP KCPYFSDVEN
LEVPIVPEEF VAKGRTEPLY LTAKQIVERG YANEWMAFFM ALATKFLKEL GVPVERQKFL
GKLPHERAHY SAKSYDQMVL TERFGWIEVS GHAYRTDYDL SGHSKYSGQE LVLERRLPTP
REVEVARLYP NPVAIREKYG EKTGEVIKAL KENENMVLEA FRTGRQEVVL GQYVITRDMV
FIKIEKRKTD IEKFVPHVVE PSFGLDRILY VVLEHAVAIE NGRVYLRLPP DIAPVAVCIL
PIVKRADYVE IGRRLMRRLG DEGFTVIYED EGTIGSRYAY CDEIGTPLAV TIDEKTPVDE
TVTIRDRDTK RQVRIKLEKV PTFVAMVKRG MTFQDVAETL GAHPV