Gene Pisl_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0788 
Symbol 
ID4617100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp711853 
End bp712539 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content45% 
IMG OID639783882 
ProductSPP-like hydrolase 
Protein accessionYP_930307 
Protein GI119872300 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00672208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAATGTA AGATTTTAGT AGCAGATTTA GATGGCACGT TGACTCTGAG TAGAAACACC 
TACGAGCTTT CCGTAGAGGC GCTTTTGGCT TTACGTAAAG CCCGCGACAG TGGCTTAAGA
GTTGTACTAG CCACGGCTAA CGGTCTAGAT TTTGCGCTTA CTATAGCTAG GTATTTGGGT
GTTCGTGACG TAATTGCCGA AAATGGCTGT CTTATTCACC TTGATGGAGT GACGTACGAG
CTATGTTCCG GCGATATGTC TATAGTAGAT AAGGTAATTA TTTCAACAGG GGCTGTTATA
CCGAGTCCTC AGAATAGATG TAGAAAGTAC GATATGGCAT ATATACCTCT TGTTAAAGAC
ACGCTAGAGA AAGTAAGAGC TGTTGTTGGT ACTGGCTACA TTGTCGAGTC TAGTGGATAT
GCAATACATG TAAGACCTGC CGGAGTAGAC AAGGGAGTTG CTGTCAGTTG GCTCTGTAGA
AAACTCGATG TCTCGTGCCA TCAAGTTGCT ACGGTTGGAG ATAGTGATGT AGATGTAGGG
ATGTTAAGTA TTGCATGGGG TATTGCCGTT GGTAATGCCA CAGAGGCTGC CAAAAAAGCT
GCACGTGTGG TTGTCGAAGA GCCAAGCGGC CTTGGCTTTA AAGAAGCCGT CAACCTAATT
CTCTCAGGAG ACGCTTGTAC CCCTTAG
 
Protein sequence
MKCKILVADL DGTLTLSRNT YELSVEALLA LRKARDSGLR VVLATANGLD FALTIARYLG 
VRDVIAENGC LIHLDGVTYE LCSGDMSIVD KVIISTGAVI PSPQNRCRKY DMAYIPLVKD
TLEKVRAVVG TGYIVESSGY AIHVRPAGVD KGVAVSWLCR KLDVSCHQVA TVGDSDVDVG
MLSIAWGIAV GNATEAAKKA ARVVVEEPSG LGFKEAVNLI LSGDACTP