Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0788 |
Symbol | |
ID | 4617100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 711853 |
End bp | 712539 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783882 |
Product | SPP-like hydrolase |
Protein accession | YP_930307 |
Protein GI | 119872300 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB [TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00672208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAAATGTA AGATTTTAGT AGCAGATTTA GATGGCACGT TGACTCTGAG TAGAAACACC TACGAGCTTT CCGTAGAGGC GCTTTTGGCT TTACGTAAAG CCCGCGACAG TGGCTTAAGA GTTGTACTAG CCACGGCTAA CGGTCTAGAT TTTGCGCTTA CTATAGCTAG GTATTTGGGT GTTCGTGACG TAATTGCCGA AAATGGCTGT CTTATTCACC TTGATGGAGT GACGTACGAG CTATGTTCCG GCGATATGTC TATAGTAGAT AAGGTAATTA TTTCAACAGG GGCTGTTATA CCGAGTCCTC AGAATAGATG TAGAAAGTAC GATATGGCAT ATATACCTCT TGTTAAAGAC ACGCTAGAGA AAGTAAGAGC TGTTGTTGGT ACTGGCTACA TTGTCGAGTC TAGTGGATAT GCAATACATG TAAGACCTGC CGGAGTAGAC AAGGGAGTTG CTGTCAGTTG GCTCTGTAGA AAACTCGATG TCTCGTGCCA TCAAGTTGCT ACGGTTGGAG ATAGTGATGT AGATGTAGGG ATGTTAAGTA TTGCATGGGG TATTGCCGTT GGTAATGCCA CAGAGGCTGC CAAAAAAGCT GCACGTGTGG TTGTCGAAGA GCCAAGCGGC CTTGGCTTTA AAGAAGCCGT CAACCTAATT CTCTCAGGAG ACGCTTGTAC CCCTTAG
|
Protein sequence | MKCKILVADL DGTLTLSRNT YELSVEALLA LRKARDSGLR VVLATANGLD FALTIARYLG VRDVIAENGC LIHLDGVTYE LCSGDMSIVD KVIISTGAVI PSPQNRCRKY DMAYIPLVKD TLEKVRAVVG TGYIVESSGY AIHVRPAGVD KGVAVSWLCR KLDVSCHQVA TVGDSDVDVG MLSIAWGIAV GNATEAAKKA ARVVVEEPSG LGFKEAVNLI LSGDACTP
|
| |