Gene Pisl_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0500 
Symbol 
ID4616736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp466037 
End bp466942 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID639783588 
Product2-ketoisovalerate ferredoxin oxidoreductase subunit beta 
Protein accessionYP_930021 
Protein GI119872014 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.574574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCC GTATAGATCA GTTGCCGAAG AAAAAATACA TACTACCAGG CAATGCGGCG 
TGTGCTGGGT GTGGTATGAT GATAGGCTTG AAGGTCTTGG GCATGGCGAT TGGCGACGAG
TCTGTGCTAG TAATACCAGC GAGTTGTGCA TCTGTTGTCC AAGGCCTAGC TCCGAAAACC
GGCATTGCGA TACCCATTTT AAATGTGCCA TTTGCCTCTT CTGCCGCAGT AGCTACAGGC
GTGGCAGAAG CATTTAAAAC ACTCGGCATA AAGGGACATG TAGTTGTATG GGCTGGCGAC
GGCGGTACTG CGGATATTGG TTTTGCGACC TTGAGCGGTG CCGCAGAGAG AAATAGTAAT
ATAATCTATA TCATGTACGA CAACGAGGCG TATATGAACA CAGGCATACA ACGTAGTAGC
TCAACGCCGC GCGCTGCTTG GACTACAACA ACTCCGGCTG GAAAACGCGA GAGGAAAAAA
GATGTAGCCC TCCTCATGGC TATGCACGGA GTGCCCTACG TAGCCACGGC CAGTATCGCG
TATCCACAAG ATTTCTATAG AAAGCTGAAG AGAGCTACTG AGATAGACGG TTTTAAATTT
ATACACCTCC ATACCCCTTG TCCCCCCGGC TGGAGATTTG ACCCCGCAAA AACCGTAGAA
GTTGCAAGAC TTGCTGTAGA GACAGGCGCT TGGATATTGT GGGAATACGA CCACGGGCAG
TTTAGATTAA ACCCACCGAG TACGATATAC GCCGATAAAA CAAAGAGGAG GCCATTGTCG
GAATATTTGA AACTACAGGG TAGATTTGCC CATCTTACTG AAGACGATAT TAAAGCGCTG
GAAGAAGACC TAGAAGATAA ATGGCAGACT ATACTTGCGC TCTCACAATC TTTCTCACGT
CGTTAA
 
Protein sequence
MSFRIDQLPK KKYILPGNAA CAGCGMMIGL KVLGMAIGDE SVLVIPASCA SVVQGLAPKT 
GIAIPILNVP FASSAAVATG VAEAFKTLGI KGHVVVWAGD GGTADIGFAT LSGAAERNSN
IIYIMYDNEA YMNTGIQRSS STPRAAWTTT TPAGKRERKK DVALLMAMHG VPYVATASIA
YPQDFYRKLK RATEIDGFKF IHLHTPCPPG WRFDPAKTVE VARLAVETGA WILWEYDHGQ
FRLNPPSTIY ADKTKRRPLS EYLKLQGRFA HLTEDDIKAL EEDLEDKWQT ILALSQSFSR
R