Gene Pisl_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0474 
Symbol 
ID4617986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp445354 
End bp446358 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content44% 
IMG OID639783559 
Productinner-membrane translocator 
Protein accessionYP_929995 
Protein GI119871988 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000132511 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATAC CTCTTCCATT GTTAGACGTA GTTCTTACGC TTGTCACCGC CTTTGCCATA 
GGCGCAGTAG TTATGTGGAT CTCTGGATAC GACCCAATAA TGTCGTATAG ATCTATGTTA
TTTACCCCGC TCTTAGACTA TACATATTTC TTTTCTGCAC TGGCCTTTTC GGCGCCAATA
GTTCTAACCG GTCTTACCTT CGCCGTAGGT TTAAGAGCAG GTTTGTTTAA CATAGGTGCA
GAGGGCCAAG TATATATGGG GGCTTTGGGC GCTGTAGTTG CGGCATATAT TACAAAGAGT
AGTTTGGCGT TACCTCTTGC GTTGTTTATA GGGTTGACTT TAGCTTGTGT TTGGTCTTTA
GTACCTGCTC TTCTTAAAAT CTGGAGAGGG GTAAACGAGG TGATAACTAC TATAATGATG
AATTGGATTG CGTATTGGGT TGTAATAATG GCTGTGTCTA CAGTATTTAC AAATCCTCTT
CAGCCAGAGG AGTCTATAAA AACACCTGAG CCAGCGCGTC TAACGCCGCT AGTAGCTGGG
ACAGATCTCA CGGCGGCAGT TCCGTTGTCT TATATAATAG CTTTGTTTGT TTATATCTTT
GTTAAATACA GTGTATGGGG CTATCGAATT TCTATAAGCG GTCAAAACCC AATAGTAGCT
AAGTCCTACG GCATTGAGCC TATGCGGTCG ATAATGCTGT CGTTTTTAAT AGGCGCATTA
ACGGCGGGCG TTGCCGGCGT TATGCAAGTG GTCGCCAAGC CGCCGTCTTA TAGCTTAATG
AGAAATCTCG CCAATGTTTA TGGCTTAGGT TTCGACGGAA TTACCGCAGC TATGTTAGGC
CGCGGACATC CCATAGGCGT GGCTATTGCG GCGTTATTCC TCGGCGTTTT ACAAGAAGGT
GCGAGACATA TGCAAATAGA GGCTGGAACG CCCTTTGAGT TTGTGAGGAT AATACAAGGC
GTTATAATAT TGTTATTAGC TATACAGATG TTAAAAAAGA CATGA
 
Protein sequence
MRIPLPLLDV VLTLVTAFAI GAVVMWISGY DPIMSYRSML FTPLLDYTYF FSALAFSAPI 
VLTGLTFAVG LRAGLFNIGA EGQVYMGALG AVVAAYITKS SLALPLALFI GLTLACVWSL
VPALLKIWRG VNEVITTIMM NWIAYWVVIM AVSTVFTNPL QPEESIKTPE PARLTPLVAG
TDLTAAVPLS YIIALFVYIF VKYSVWGYRI SISGQNPIVA KSYGIEPMRS IMLSFLIGAL
TAGVAGVMQV VAKPPSYSLM RNLANVYGLG FDGITAAMLG RGHPIGVAIA ALFLGVLQEG
ARHMQIEAGT PFEFVRIIQG VIILLLAIQM LKKT