| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0438 |
|---|
| Symbol | |
|---|
| ID | 4616310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 422061 |
|---|
| End bp | 422810 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639783521 |
|---|
| Product | proliferating cell nuclear antigen PcnA |
|---|
| Protein accession | YP_929959 |
|---|
| Protein GI | 119871952 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC ACATATTAAC ATACCTAGAC GCCAAGGAAT TTGCATATAT AGTAGACTCA
ATTTCTGTAT TGGTAGAGGA GGCAAGTTTT ATCGTCAGAA GCGACGGCCT TTACCTCAGG
GCACTTGATG CATCTAGAAC TGCGATGGTA GATCTTTCAA TACCCAAGGA GGCGTTTGAA
GAATTTCCAG AAGTAGAGGA GTTGCGTATT GGCCTCAATT TCAAAGACTT GAAGAAGGTC
TTGAGACGGA TTAAGAAGGG GGATAAGATA TCTATGGAGA TTGAGGAGGG TAGAGTGAGA
ATAAAACTAG TTGGGAAATC TGTGAGATCT ATTACAATAC CGACGATAGA GGTTGTCAGC
GAAGACCTCC CAACGCCAAA GGTAGTATTT ACGGCAATGG TAAAAACTGC CAGCGATGTC
TTAGCTTCTG CAGTAAAAGA CGCAGATGCT ATAGCAGATG AGATAAAATT TGAGGCTAAT
GAAGAGGCGT TGTTAATGAA GGCGTCTAGC GATAAAGGCG AGGTAGAAGT TAAGCTTGAT
AAAAACAGCG AGCTCGTCTA CGAATTTGAT GTAAAAGAGC CTGCTTCCGC CCGATACTCT
CTGGAATATC TAGTTGATAT TGTCGGAAAG ACGTCTAAAA TCAGCGACAT AGTTACAATT
GAGTTAGCAA CGGCGAAACC CCTACTGTTG ACCTTCGACA TTCCCGCGGG CGGCAAAATC
TCCTACTTCC TAGCGCCTAG AGTAGAGTGA
|
|---|
| Protein sequence | MSKHILTYLD AKEFAYIVDS ISVLVEEASF IVRSDGLYLR ALDASRTAMV DLSIPKEAFE
EFPEVEELRI GLNFKDLKKV LRRIKKGDKI SMEIEEGRVR IKLVGKSVRS ITIPTIEVVS
EDLPTPKVVF TAMVKTASDV LASAVKDADA IADEIKFEAN EEALLMKASS DKGEVEVKLD
KNSELVYEFD VKEPASARYS LEYLVDIVGK TSKISDIVTI ELATAKPLLL TFDIPAGGKI
SYFLAPRVE
|
|---|
| |