Gene Pisl_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0395 
Symbol 
ID4616808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp381080 
End bp382651 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content44% 
IMG OID639783475 
Producthypothetical protein 
Protein accessionYP_929916 
Protein GI119871909 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.190309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0716823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAA TAGGCGTAGT TGTCAAATCG CCCTCTATAT ACTACTATAT ATTTAGACCA 
TTTCGAGGCG TTGAAATAGA TGTCGGCTCT TTTGTAGCTA CAGAGGTAGA TGGACTACGC
GTCATTTCTC GCATCACAGC TATTAGACAC AGAAATGCCG CGACAGATCC AAGACTTATC
GCACAGTTTG ACGACGAGAA TGTAATAAGG GAAATTAAGG AGACTCTAGG CATAGAAGAC
GTCTTGTATT ACACAGAGGC GAGAGCTGTC GTATTAGGCG CTAGAGTCGG ACGTAGGATA
TTGAAACCTC AAAAGCCAGT GAAACCTCTC AGCTACGTCT ATAGAATTGT AGAACGTGAA
TTAGAAGAGT TTTTCGCACC GCCTGAAGAC GGAACGTATA TCACTATAGG TAGAATAAGG
GGCACGAACA TATCTGCAAA AATCAACGCC GAAAAACTAG TTACTCACCA CTGCGCTATA
TTAGCCAGCA CAGGAGCTGG GAAGAGTTGG CTCGCAGGAG TCATAATAGA ACGCCTTAGT
CTCCTAGACA TACCAATAAT AGTTGTTGAC CCACATGGCG AATACTCGGC AATGTCTATA
CCTCTGACAG AAGAGGGAAA AGCCGTCGCA GAAAAAGTAA GGATATATGT AGTGGGGAAA
GTAGATACTA GACCCGTAGA CGACGCATTT GAAAAAAGAT ATGGCACAAG GCGTGTGTAT
ACAAGGATCG GGATAAACCC AAGAAGTTTA CCTCTACGCA CACTTGAAAA ACTTCTTGAC
ATATTATACG GGCTCACAGA CGCACAGAAG AGAATTCTAG AAGAGGGTTG GCAAGTTGCT
ACAAACTACG GCGAGAGACA GCCCCTTACT ACAGTTGAGG AATTGATACG AGAGGTTTTA
GAAGGGGGCA AACACGCGGC GCCTCCCGGC TACGCTGGCG AAATGGCGCT CCGCGGATTA
GAGGGTAGAC TCAGATCTCT TTTCTATACA AGCCCTATAT TCATAACTAG ATATGGAGAG
GTGTACCAAG GAGAGCCTAT TAAGTTAATT GACCCACAAT CTTTTGTCAC CACGCCTGCT
CTGCATATTT TGGACATATC TGGACTAGAC AGCGTTGACC AACAACTGTT TCTAGCCGTA
TTTCTAGATC AGATATACAG AGTTGCGACA CAAAGGAAAA ACCTCACAAC TTTTATCGTA
ATAGAGGAGG CTCATATTTT CGCCCCATCT ACCCCCAACG CGCTTAGTAA AAACTATGTT
GTGAAAATAG CGAGAGAAGG TAGAAAGTTT GGACTCGGCC TCTGTCTCAT CACACAAAGA
CCCACTAAAC TAGACCAAGA CGTAGTTTCA CAAGCTATGA CCCAAATATT CAAAAGAATG
ATTAACCCAA GCGACTTAAA GTACGTAGCT ACAGTTGCGG AACATCTCGA AGATCCACGT
CCATTACGGA CGTTAGATGA AACAGAGGCT ATGATTACAG GGATCTCTGT GCCCGTGCCT
CTACTAATTG TCGTCGGTCA AAGATGGACA CACCATGGGG GAATAACTCC TAGAATTAAG
AGGGAGATGT AG
 
Protein sequence
MEKIGVVVKS PSIYYYIFRP FRGVEIDVGS FVATEVDGLR VISRITAIRH RNAATDPRLI 
AQFDDENVIR EIKETLGIED VLYYTEARAV VLGARVGRRI LKPQKPVKPL SYVYRIVERE
LEEFFAPPED GTYITIGRIR GTNISAKINA EKLVTHHCAI LASTGAGKSW LAGVIIERLS
LLDIPIIVVD PHGEYSAMSI PLTEEGKAVA EKVRIYVVGK VDTRPVDDAF EKRYGTRRVY
TRIGINPRSL PLRTLEKLLD ILYGLTDAQK RILEEGWQVA TNYGERQPLT TVEELIREVL
EGGKHAAPPG YAGEMALRGL EGRLRSLFYT SPIFITRYGE VYQGEPIKLI DPQSFVTTPA
LHILDISGLD SVDQQLFLAV FLDQIYRVAT QRKNLTTFIV IEEAHIFAPS TPNALSKNYV
VKIAREGRKF GLGLCLITQR PTKLDQDVVS QAMTQIFKRM INPSDLKYVA TVAEHLEDPR
PLRTLDETEA MITGISVPVP LLIVVGQRWT HHGGITPRIK REM