Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0284 |
Symbol | |
ID | 4617584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 283800 |
End bp | 284342 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783363 |
Product | hypothetical protein |
Protein accession | YP_929806 |
Protein GI | 119871799 |
COG category | [S] Function unknown |
COG ID | [COG3371] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0402669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGGCA AAATACTTTT AGTATTAGGT TCTTTACAGT TTATAGTTGT AATGTTAATT GCAGAACAGC TCTACCCCGG CTACAACCCA ATGTATAACT ACATCAGCGA CCTAGGAGCT TTAAAAGCGC CGACATCCAC ACTTTTTAAC ACAAGCGTCA TTCTCCTCGG CCTATTAGGT CTTGCCGCGG CTACACTCCT CAGAAAAGAA CTCGGCTCCT TAGGAGCTGC AATACTCGCA ATTGCAGCCA TGGGGGCGGT GGGAGTTGGG ATATTCCCAG AGGACTACGG CACTCCCCAC GGAGTGTCTG CATTAATTGC GTTTCTCTTC GGCGCAATAA CTGTCATAAT TATGGGGTTT AGAAAAGGCG GGATTTATAA ATTACTAGGC ATAGCGATGG GAGCCATATC GCTGGTCGCT CTCATGTTGT TCATACCTAG AACCCAAACT CCGCTTGGAA TAGGCGGGTT AGAGAGACTA ATAGTATACC CAGTGTTGCT GTATTTCATA AGATATGGCC TCAGTAGACA AAAAACTCGT TAA
|
Protein sequence | MLGKILLVLG SLQFIVVMLI AEQLYPGYNP MYNYISDLGA LKAPTSTLFN TSVILLGLLG LAAATLLRKE LGSLGAAILA IAAMGAVGVG IFPEDYGTPH GVSALIAFLF GAITVIIMGF RKGGIYKLLG IAMGAISLVA LMLFIPRTQT PLGIGGLERL IVYPVLLYFI RYGLSRQKTR
|
| |