Gene Pisl_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0284 
Symbol 
ID4617584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp283800 
End bp284342 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID639783363 
Producthypothetical protein 
Protein accessionYP_929806 
Protein GI119871799 
COG category[S] Function unknown 
COG ID[COG3371] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0402669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA AAATACTTTT AGTATTAGGT TCTTTACAGT TTATAGTTGT AATGTTAATT 
GCAGAACAGC TCTACCCCGG CTACAACCCA ATGTATAACT ACATCAGCGA CCTAGGAGCT
TTAAAAGCGC CGACATCCAC ACTTTTTAAC ACAAGCGTCA TTCTCCTCGG CCTATTAGGT
CTTGCCGCGG CTACACTCCT CAGAAAAGAA CTCGGCTCCT TAGGAGCTGC AATACTCGCA
ATTGCAGCCA TGGGGGCGGT GGGAGTTGGG ATATTCCCAG AGGACTACGG CACTCCCCAC
GGAGTGTCTG CATTAATTGC GTTTCTCTTC GGCGCAATAA CTGTCATAAT TATGGGGTTT
AGAAAAGGCG GGATTTATAA ATTACTAGGC ATAGCGATGG GAGCCATATC GCTGGTCGCT
CTCATGTTGT TCATACCTAG AACCCAAACT CCGCTTGGAA TAGGCGGGTT AGAGAGACTA
ATAGTATACC CAGTGTTGCT GTATTTCATA AGATATGGCC TCAGTAGACA AAAAACTCGT
TAA
 
Protein sequence
MLGKILLVLG SLQFIVVMLI AEQLYPGYNP MYNYISDLGA LKAPTSTLFN TSVILLGLLG 
LAAATLLRKE LGSLGAAILA IAAMGAVGVG IFPEDYGTPH GVSALIAFLF GAITVIIMGF
RKGGIYKLLG IAMGAISLVA LMLFIPRTQT PLGIGGLERL IVYPVLLYFI RYGLSRQKTR