Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0243 |
Symbol | |
ID | 4616397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 236602 |
End bp | 237858 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639783323 |
Product | transposase, IS605 OrfB |
Protein accession | YP_929766 |
Protein GI | 119871759 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.13657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATGA ACCAAGTCTA CAGAGTACTG AAGATCAAAA TCCCGTGGCG TCTCGTCGAA GAGCGACCGG ACGTCCTAGA CCTAGTGACG AGGATGCACT TGGCCGTTGA AGAGTACGCC AAAACATTGC TCAAAGAAAT CACGGGGCAA GGGGAGCCGA AGCTGACGAC AGAGGAGATA GACCGCTTGC TTACTCCCGA CAGGAGGGAG TTGGCTGTCA AGATAATAGA TGTGGCGTTC CCCAAATACG GGTTGGGGAG GTACTTCGTA AAGCAAGCTA AGATGTTTTG GCGCGAGACG GCATTTTGGC GAGCGGTTCC CCTTGACGCC CAACTTAGGA TCGAGAACGA GAGGGACGCG GGCAGAGCCG TCTTCGTCGG CCTAAAGAGC GGCGTCCTCA GAGTACGGAA AACCGGCATA CCGCCTTTCG CCGTCGAGCT GAAGAAGGGC AACGTTGCTT GGATAAGAGA GAGACTACAA GAGGGCGCCA GACTCAAACT GGCGTTTTTG GGCATAGAAA GGCTGAAGGG CAAGAAGGAG CCGACCTACG GAAAGCTCTA CATAGCGCTC GTCTTTGCCC GCAAAGTTCA ACAAGTGGAA CCAAAGGCCG TTGTTGCCGT TGATGTGAAC AGATTGGATC ATGGAGTCAT GATGGGTCTC CTCGTGGACG GAAAGCTGAG ACAGACATTG AGACTTCTAG ACGAAGACGC GGTGAGAGAG CTGAGGAGAC TCCACGAGGA GATAAGCCGT CTCGACGAGC AAGCCGCTAG GGAGGCGGAC CCCGCCAGAA GGAGACGTCT CGAGGAGAGG GCGCGTCACC TTAAATCCAG ACGGTTTAGG AAGATAAGAG GTGTCGTTAA AGACATCGTT GGCGAAATCA TAAAATTAGC AAGGGAACAC CAAGCCGCAA TCGTGGTGGA CACAATGGAA GACGAAACAT ATCGAGAGCT CAAGGAGGGC AACTGGAGTG GAGAGAAGAA ACACCTCCTA GACGGGTTGG GCCAGCTGAG GAGACGCTTG CAAACGCTTG CACGGTGGTA TGGATTGCCT TACCTTGAGG AAAGACTGTA CTCGACCGTC TGCCCCCGCT GTGGCGCGAA GATGGAAGAG TTGAATAACA GGCGGATGCA ATGCCCCGTC TGCGGCTTCA ACGACAACAG AGACAACGTG CCACTGATAT GGGCTAAAAA GCGTTACTGG GAGCTACTCC AGAAACAACC CGCTTTTTCG GCGACCACCA CACTTTTAAC CTCGTAA
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Protein sequence | MHMNQVYRVL KIKIPWRLVE ERPDVLDLVT RMHLAVEEYA KTLLKEITGQ GEPKLTTEEI DRLLTPDRRE LAVKIIDVAF PKYGLGRYFV KQAKMFWRET AFWRAVPLDA QLRIENERDA GRAVFVGLKS GVLRVRKTGI PPFAVELKKG NVAWIRERLQ EGARLKLAFL GIERLKGKKE PTYGKLYIAL VFARKVQQVE PKAVVAVDVN RLDHGVMMGL LVDGKLRQTL RLLDEDAVRE LRRLHEEISR LDEQAAREAD PARRRRLEER ARHLKSRRFR KIRGVVKDIV GEIIKLAREH QAAIVVDTME DETYRELKEG NWSGEKKHLL DGLGQLRRRL QTLARWYGLP YLEERLYSTV CPRCGAKMEE LNNRRMQCPV CGFNDNRDNV PLIWAKKRYW ELLQKQPAFS ATTTLLTS
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