Gene Pisl_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0233 
Symbol 
ID4617076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp228727 
End bp229488 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content57% 
IMG OID639783313 
ProductABC transporter related 
Protein accessionYP_929756 
Protein GI119871749 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG TAAAAGGCCT TGAGTTTAGC TACGGCGAGT TTACAATCAG CGGCGTGACC 
TTTTCCGTGG GGAAGGGCGA GGTGGCGGTT CTGCTGGGGC CAAACGGCAG CGGCAAAACC
ACAATTTTGA AGGCTATCTA CGGGTTGTTA AAGCCGAGGG CGAGGTGCGT ATACGTCGAT
GGGGCAGACT TCCACTCCCT GCCCTTTAGG AGGAGGTCTC AACTCGCTGG CTATGTGCCG
CAAAGCCACC ACCCGCCCTT CCCCTATAGG GTGATAGACG TAGTGGTCAC CGGCTTTGCC
CCGCGGCTTG GCCTCTTCCA GAGCCCGGGG AGGGGGCACT ACGAGAAGGC GTTGGAGAAG
CTACGGCTCT TGGGTATAGA ACGCCTCGCC GAGAGACCCT ACACTCATTT GAGCGGGGGG
CAGCTACAGC TTGTCCTCAT AGCCAGGGCG CTTGTACAAG AGCCTCAGGT CCTCCTCCTA
GACGAGCCCA CAGCCCACCT AGATTTTAAA AACCAGCTGA GGGTTCTCTC CACCGTTAGA
AGGCTGGCGA AAGCCAGCGG CGTGGCCGTC TTGATGACTC TCCACGACCC CAACCTCGCC
GCAGCGTATT CGGACAAAAT TATCGTGGTG AAAGACGGGA GAGTGGTGGC GGTGGGGGCT
CCCCGAGATG TAATTAAAGA CGACATAATT AGGGAGGTCT ACGGCGTAAG CGTTAAAGTG
CTTGAGGTAG ACGGCAGAGT GGTGGTACTC CCCCATGATT AA
 
Protein sequence
MLEVKGLEFS YGEFTISGVT FSVGKGEVAV LLGPNGSGKT TILKAIYGLL KPRARCVYVD 
GADFHSLPFR RRSQLAGYVP QSHHPPFPYR VIDVVVTGFA PRLGLFQSPG RGHYEKALEK
LRLLGIERLA ERPYTHLSGG QLQLVLIARA LVQEPQVLLL DEPTAHLDFK NQLRVLSTVR
RLAKASGVAV LMTLHDPNLA AAYSDKIIVV KDGRVVAVGA PRDVIKDDII REVYGVSVKV
LEVDGRVVVL PHD