Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0228 |
Symbol | |
ID | 4617008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 216061 |
End bp | 219624 |
Gene Length | 3564 bp |
Protein Length | 1187 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639783309 |
Product | cobaltochelatase |
Protein accession | YP_929752 |
Protein GI | 119871745 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGATAG TAATTATCTC CACCAAGCCC TCCCTTCGTA CGCTTTTTGA CGCGGCGAAG GAAGTAGAGG CAGAGGCCGG CGTATCCATA GAGCTACAGA CCTACTATAT ACACAGCTCT GTGGACTATG CCGCTGTTGA AAACGCCGAC GTTATCTTAA TAGACGTGAG AGGGGGTGCG CCTAGGGAGC TTATAAATGC CGTGGAGAAA AGCAGAGCTA AAGTAGTCAT CCCATTGGTG GGCGGCTCGC CTGGAACACT TGCGCTTTTA AGACTTGGAG GCTTCAGCGG AGTCGAAATA GCGAAGAGAG TGCCGGAGCA AGACTTCGAC ACAGACCGCG TAGACTTCTC AAAGATCTCC AAGGTGTTAT CCGCCGTAGA AACTGCGGGC AGGGTGTTGC CAGTGGGGCC GTTGAGACAT CTAAGAAATT GGATCTGGGC CACGAAATAC TGGGCCTACT GGGGTAGGGA AAACTTAGCT AATTTGTTCA AGCTTATTCT CGCCGAGTAT TTCGGCGCAG GGGTAAAATA CGGCGAGCCT AAGCTAGTGG GAGAATTCGC AGTGTATACC CCTGGCATAG GATTTACATA TAAGCCGCCA GAGACGAAAG GGCCTGTAGT GTTGATATTT ACCTACGCAG GTATGCACTT CGATGAAACT CTGCCCGTAG CCCTCAAACT AAAGGAGGAG TTGGAGAAAC TCGGCGTAAA TGCCTTTATT GCGACAGGAG GAGTCACAGA TGGGCTACTT AAACAACTGG AAGCGTTGAG GAAGTACACC CTCGTAGGGG GGAGGTCTGT AGACGCCGTC ATAAACCTCC AGTGGTTTGT CATAAACGGC GGGCCCTACG GCGGATCTCC GGAGCCCACC CGCGAGCTGT TTAAAGAAAG GGGTTCTCTC CTCTTCAACG GCCTGGTCGC CTATACGCGG AGGATTTCGC AGTGGGAGAA AGATCCCAGA GGTCTCTCTC CCGTGGAAGT TGTAGGGGGC GTCGCCCTGC CGGAGATAGA TGGGGCAATA GAGCCTATTA TCTCGGCGGG TTTAGACGAC AGCATATATG CAGAAATGGT AGTCTTAGAG GAGAGAGTAA AGAAAAAGGC TAGGAGAGTG GCCAACTGGA TAAAGCTCAG GCAGAAGCCC CCCTCAGAGA GGAGGGTGGC GATTGTGATA TACAACTACC CACCGGGGGA GCATAATGTG GGCAATGCCG CATATTTAGA CACTTTGGCT AGCCTTGCTG TAATTCTAAA GGCGTTGAGA GAAGCCGGCT ATAGGACCCG GGCGTTAGAT AAAGAGGAGC TTCGACGTCT TATAGCAGAG AGGTTTTTAG TCAACTCGCC GCAGTGGGGA AGCCATGGCG ATGTGCCAAA GTTGCCGGTG TCTGAATACT TAAGGTGGTT CAACACACTG GCCAACAGAG ACGAGGTTAT AAAAACGTGG GGCGAGCCCC CAGGCGGTGT AAACGTAGAG GGGGACAGCT TTTTAATCCC CGGCGTAGTA CTCGACAACG TCTTCATCGG CGTGCAACCC CCCAGAGGCT TCCACGAAGA TCCATCTAAA CTGTATCACT CAAAGGACAT CCCGCCTCAC CACCAGTACT TGGCCTTCTA CTACTGGATT AAAGAGGTCT TTAAGGCAGA CGCAATAATA CATGTAGGTA CACACGGCAC GCTTGAGCTT ATGCCAGGGA AAGAGGTGGG GTTATCGGAT AGGTGTTGGC CTGATATTCT CATCGGCGAC ACCCCCCACA TATACATCTA CCATGTGACA AACCCGTCTG AGAAGACTAT CGCCAAGAGG AGGAGCTACG CCTATATTAT AACACACGGC ACTCCGCCGT TTACACACGC AGATCTCTAC GGCGAATATG TGGAGCTTGA GGAGCTCCTA GAGGAGGCCG AGAAGGGGGG AGAAGACGTG AGGAGGTTAA TAGAGGAGAA GTGTAGAAAA CTAAATCTCC CCTGCGGCGA CTTGGAGAGG TTACACGACT ACCTAATGGA GATGAAACGG GCGGTGATCC CGCGGGGCCT CCACGTCTTT GGCAGTAGGT GGAGTGTAGA AGACGTAGTG AACTACATAA CCTTTGTCCT TAGGAGAGAG GGGGATGTCC CATCGCTACA TAGGCTAATT CTAGAGGAGA GGGGGGTCAA CTACGACGGA GTAGAGAAGG CGGGAGGGGG GAGGTTGCTT GTAGAGGCGG AGGAGGAGGC GAGAAGGATG ATTAAAGAAG CTCTCTCGGG GGGAGACCCG GCTAAGTATT TCAAAAAGAG GAGGAGAGAG GCCGAGGAGG TGTTTAGATA TGTACGTGAT TTAGCCAAGA GAATTCTAGA GTCTGACGAA GTGTCCTCTT TACTAAAGGC CTTAGATGGG AGATATGTAG AGCCTAGAGT CGCCGGAGAG CCGTTGAGAA CGCCAGAGGT TTTCCCCACA GGCTCCCACG GCTACGCCTT CGACCCCAGG CTTATACCTA CGAAAGCCGC GTATATACGC GGGATAAACC TCGCCGAGGA GTTGGTAAAG AGGTATAGGG AGAAGTACGG ACGTTACCCA GAGAGTGTCG CTGTCGTCCT ATGGGGCTTT GAAACTGCGC AGACCAGAGG CGAGACGGTA GGCCAAATCT TACAGCTCTT AGGCGTGAGA CTTGTGAGAA AACACGGACC TTGGGCCCCC GAGCTTGAGC CTATTCCTCT GGAGGAGCTC GGGAGGCCGA GGATAGACGT GGTTGTAACA ATCTGCGGTT TCTTCCGCGA CATGTTTCCC AACCTCATCT CTCTCATAGA TAGAGCGGTG AAGCTAGTTG CCAGCTTAGA TGAACCGCTT GAGATGAACT ACGTGAGAAA ACACTACCTT GAAATAGGCC GCATCACTAG GATATTTGGC CCTAAGCCGG GGACATACGG CACCCGTCTC CCCGAGTTTA TAGAGAGCTC TAGTTGGAAA AACGAGGGGG AGCTCGTCGA GGTGTACGTG GGAGACATGA TGTATGGATA CGGCGATGAT ATCCACGGCG AAGCTATGAG AGAGCTTTTC GTACAGCTCC TTAAGAAGGT AGAGGTGGTG AGCCAAGTGA GAAGCGCTAC GGAGTACGAC ATAGCCGACC TAGACCACTA CTACGAATTT CTCGGCGGGC TTAAAAAAGC CGTGGAGACT CTAGCCGGAA GGAGGGTGGA GGCCTATTGG GTAGACGCCA CTGGAGAAAA GATGAGAATT AGGACGGTAG AAGAGGCGGT AGACTTCGCC CTAAGGACAA GATTACTAAA CCCCAAGTGG GCTGAGGAGA TGCTTAAACA CGGCTACGAC GGGGCGCGGG AGATCGCCAA GAGGGTGGAA TATGTGCTAG GGCATGCCGC GTTAACAGGC ACGGTGGATA GATGGTTCTG GCGTCAAATA GCTGAGATGT ATGTAAAAAA TATTGAGATG AGAGAACGAA TCAAAACAGT AAACCCATGG GCGCTTTATG AAATTATAAA ACGGCTAGAG GAAGCCCACA GAAGAGGCTA CTGGGAAGGC GACGAAGAAA TTAGAAAAAT TGCAGAAGAG CTAGAGGGCA TATTAGAGGA GTAA
|
Protein sequence | MKIVIISTKP SLRTLFDAAK EVEAEAGVSI ELQTYYIHSS VDYAAVENAD VILIDVRGGA PRELINAVEK SRAKVVIPLV GGSPGTLALL RLGGFSGVEI AKRVPEQDFD TDRVDFSKIS KVLSAVETAG RVLPVGPLRH LRNWIWATKY WAYWGRENLA NLFKLILAEY FGAGVKYGEP KLVGEFAVYT PGIGFTYKPP ETKGPVVLIF TYAGMHFDET LPVALKLKEE LEKLGVNAFI ATGGVTDGLL KQLEALRKYT LVGGRSVDAV INLQWFVING GPYGGSPEPT RELFKERGSL LFNGLVAYTR RISQWEKDPR GLSPVEVVGG VALPEIDGAI EPIISAGLDD SIYAEMVVLE ERVKKKARRV ANWIKLRQKP PSERRVAIVI YNYPPGEHNV GNAAYLDTLA SLAVILKALR EAGYRTRALD KEELRRLIAE RFLVNSPQWG SHGDVPKLPV SEYLRWFNTL ANRDEVIKTW GEPPGGVNVE GDSFLIPGVV LDNVFIGVQP PRGFHEDPSK LYHSKDIPPH HQYLAFYYWI KEVFKADAII HVGTHGTLEL MPGKEVGLSD RCWPDILIGD TPHIYIYHVT NPSEKTIAKR RSYAYIITHG TPPFTHADLY GEYVELEELL EEAEKGGEDV RRLIEEKCRK LNLPCGDLER LHDYLMEMKR AVIPRGLHVF GSRWSVEDVV NYITFVLRRE GDVPSLHRLI LEERGVNYDG VEKAGGGRLL VEAEEEARRM IKEALSGGDP AKYFKKRRRE AEEVFRYVRD LAKRILESDE VSSLLKALDG RYVEPRVAGE PLRTPEVFPT GSHGYAFDPR LIPTKAAYIR GINLAEELVK RYREKYGRYP ESVAVVLWGF ETAQTRGETV GQILQLLGVR LVRKHGPWAP ELEPIPLEEL GRPRIDVVVT ICGFFRDMFP NLISLIDRAV KLVASLDEPL EMNYVRKHYL EIGRITRIFG PKPGTYGTRL PEFIESSSWK NEGELVEVYV GDMMYGYGDD IHGEAMRELF VQLLKKVEVV SQVRSATEYD IADLDHYYEF LGGLKKAVET LAGRRVEAYW VDATGEKMRI RTVEEAVDFA LRTRLLNPKW AEEMLKHGYD GAREIAKRVE YVLGHAALTG TVDRWFWRQI AEMYVKNIEM RERIKTVNPW ALYEIIKRLE EAHRRGYWEG DEEIRKIAEE LEGILEE
|
| |