Gene Pisl_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0075 
Symbol 
ID4617203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp70496 
End bp71992 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content55% 
IMG OID639783157 
Productextracellular solute-binding protein 
Protein accessionYP_929602 
Protein GI119871595 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.735503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG GTCTGCTTGT GGGGGCTGTA GCTGTGGTAG TAATTGCGCT TATCGCCGCC 
CTCCTCGCCA CACAACAAGC CCCAGCGCCG TCTCCAACCA CCCCGACGCC CACAGCCACG
CCAACCCCAA GCCCCACGCC AAGTAAAACA CCAACGCCCA CGCCAACTAC CACGCCTACT
CCCACGGCGA CTACTCCGCA GGTCTGTACT ACGTTGGTTG TTATTACTAG ACATCCAACT
GACATCCTTG ATGTGACAAG GACGCTCTTT TTACAAAGCG ATGTGGCTAG GAGGTATGGG
ATTAGAGATG TGGTTTTTAG GCCTGTAGCC GCCGCCCAGT GGAGAGCTAT AATACAGACG
GGCCAGGCAG ATGTGGCGTG GGGAGGTGGG CCAACTCTCT TTGACTCGCT GTATAAAGAC
GGCCTTCTGC TCCCGTTGGA GGGAGAGGAG GTGAAGAATG CATTAGCCCA GATTCCCAAG
ACTATAGCAG GTATGCCTAT GACTCGGACG GGGCCGGATG GCAAAGTCTA CTGGGTGGCT
TGGGCAGTCT CTAGCTTCGG CATCACCATA AATACGAAGG TTCTCAAAAG CCTCGGCCTG
CCCGAGCCGA AGAGTTGGAC AGACCTGGCC TCGTTTGAGT ACGGCAAGGC CGTGCTGAGG
GGTTCGCCGG CTGCTGGCCT GTCGCAGTTG ACTAAGTCTA CTAGCAACAC TAGGATTGCT
GAGATCATAC TACAGGCCTA CGGCTGGGAC GAGGGGTGGA GGGTGATTAC TCTCACCGCG
GCCAACGGAA AGATATACGG CGGTAGCGAA GCCGTGAGAG ATGCAGTTAT AGCCGGCGAC
ATAGGCGCTG GGTGGACTAT AGACTTCTAC GGCTATACGG CACAGCTCCA GAACCCAGAC
ACGAAATATG TTGTGCCGCC AGATACCTCA GTCAACGGAG ACCCCATCGC CGTGGTGAAG
GGGACTAAGT GTAGAGAGGC GGCCGAGGCC TTTGTGGCTT GGGTGATCAC CCAGGGGCAG
GTTGTAGTGT TTGACCCCAA GGTGAACAGG ATGCCGGTCA ACCCCAATGC CTTCAACACG
CCGGAGGGGA GGAAGAGGGC GGATCTCAAG GCCGTGTACG ACTACATGCT CAACCTCAAG
ACTATAAACT TCAACGACAC CCTGGCTCTC GCCACTGAGA ACGTGGTGAT GTATTACTTC
GACGCTGCGA TTACTGACAA CGCCCAGCTT CTCCAAGACG TTTGGGCTAA ATTAGTCAAG
GCCTATCTCG CTGGAAAGAT AGATAAAGCT ACGGCAGAGG CTCTGGCCAA ACGTTTGGGC
GAGCTGGTCA CCTTTGTAGA CCCGGACACT GGCCAGCCTG TTAAATTAAC TATGGAGTAC
GCCATGAAGA TTAACGACAG AATTGCAAAC GACGCCGCCT TCCGTGACAA AATATACGCA
GCATGGAGAG ATGCTGCCAG GAAGAAGTAT CAAGAAATTG CTTCACAAAT CCCCTAA
 
Protein sequence
MRIGLLVGAV AVVVIALIAA LLATQQAPAP SPTTPTPTAT PTPSPTPSKT PTPTPTTTPT 
PTATTPQVCT TLVVITRHPT DILDVTRTLF LQSDVARRYG IRDVVFRPVA AAQWRAIIQT
GQADVAWGGG PTLFDSLYKD GLLLPLEGEE VKNALAQIPK TIAGMPMTRT GPDGKVYWVA
WAVSSFGITI NTKVLKSLGL PEPKSWTDLA SFEYGKAVLR GSPAAGLSQL TKSTSNTRIA
EIILQAYGWD EGWRVITLTA ANGKIYGGSE AVRDAVIAGD IGAGWTIDFY GYTAQLQNPD
TKYVVPPDTS VNGDPIAVVK GTKCREAAEA FVAWVITQGQ VVVFDPKVNR MPVNPNAFNT
PEGRKRADLK AVYDYMLNLK TINFNDTLAL ATENVVMYYF DAAITDNAQL LQDVWAKLVK
AYLAGKIDKA TAEALAKRLG ELVTFVDPDT GQPVKLTMEY AMKINDRIAN DAAFRDKIYA
AWRDAARKKY QEIASQIP