| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0059 |
|---|
| Symbol | |
|---|
| ID | 4617439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 53569 |
|---|
| End bp | 55635 |
|---|
| Gene Length | 2067 bp |
|---|
| Protein Length | 688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639783141 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_929586 |
|---|
| Protein GI | 119871579 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.932595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGG CGGTCCTAAT CGGAGCTCTA ATCTTGGTAA CAATAGCATT TTTGTTGCAA
ATCCAACAGC CGCCGCAGAA GATGCAAGAG ACGGCGGCTA CAACGGCGAC TCCTCCTTTG
AAGTCTCCGG AGGCGGCGGC ACCCGGCGCC ACGGCGACTA AAGCGTGCTC GGGCTCGCCT
CTTGGGTACG TGGCGCCTAC GTTGGTTAAG GTGGTTAAAG ACGCGGCGGC GGCTGCGGGC
CTCGGCACGG AGGGGATACA GTCTGTGGGG TCTGTGGAGG GGCTTAGGAG GATACAGGGC
GGCGCCAAGC CGGACCTCTT CGGGTCGGTG GATATAGAGC TGAGGCCAGA CGCCGAGAGG
GCGGGAGCCC TCCAGACCTA CTCTCTGGGG AGGTTCAAGC TGGCCCTCGT CTGCAGAGCC
CCCACGACGC TTGAGGAGCT GGCCTCCGCC AAGACGGTCT TCCCGGACCC CAACAAGGCC
CCTATCGGCT ATAGGGAGCT CGCCGCCGCG TGGATGCTGT CTCGGGACCT CGGCGTCAAC
CTCACGGCGA AGTACACCGC CCTGGGGGTG AGGTTTGTAT ACAACGGCAC TCTCTACGTC
TACATACCCA GCTCCCTCCC CAACACCGAG GCGGTAGACG TGGCCCCCAA CCTAGACGGC
TCCTGGGCTA AGTTCGAGGC GGGGGCGGGC CGCTGCATGT TCGCCTACGT CCCCTTCCTC
CTCGGCAAAG GCCTCCAGCT TAGGCCCGCC GGCGGCGGCA CCAGCTACTG GGAGCCATAC
ACGGCCGAGG CGGGCGGGAG GACCTACTAC GTGTACGTCT TCAAGCCGCC CTACGACTTC
GCCGAGGACC CGCCCATCAA AGCCGTGGCC GTCCTCCTCG GCCCGCCGGT CAAAACTATA
AGGGTGGGCC ACTTCGAGGC CTTTGTGGCC TCCTACACGG AGCTGGGCAA CTGCGTCATA
GAGTCACTGA AGAAGATGGA TTTGTCGAAG TACGGGTTTA TAACCACGGC CCGGGCTACG
GCCGGCGCGT CTAAGTCAGC TGTTGTAGAG GTGGTGGATG TGTTGGGGCG GCGGGTGTCT
GTGAAGGCGC CTGTGTCTAG AGTTGTGGCT TTGGGGCCGG GGGCGCTTAG GCTCGTGGTA
TATCTCAACG CCACAGACAA ACTAGCCGGG ATAGAAGAGA TAGAGAAGAG GCCACCGCGG
GGTAGAGACT ACGGCTACAT CCTCTGGACA AAAAACCTCA CCTCGCTCCC AGTGGTTGGG
CGGGGTGGGC CTGGTAGCCC TGTTGACTAC GAGAGGATAC TATCTGTGAG GCCGGACGTG
ATTATCATGT CGCCTTTAGT GGCCGACGCC CCCGACAAGA TCCAGGAGAA AACCGGCATA
CCCGTGGTGG TTGTGTCGGC TTTTATCGAC AGCGGCGAGG GCTGGGTCAA CTTCACTAGT
TTGTACAAGT CTCTTAGGAC CGTCGGCGTT TTGTTGGGTA GAGAGGAGAG GGCTGAGGAG
CTGGTTAGAT ACATGGAGGG TTTGATCAAA GATCTCAAGA GGCGCACCGC CAACATAACC
CAAAGGCCAA AGGTGTACGT AGGCGCAATC TCTTACAAAG GCGGCCAGCC CTTTGAAGCG
ACTCAGTCGT ACTTCCCCCC TCTGGTCTTG CTGAACACGC CGGGGGTCGC AGATAGATAT
GGAATAAAAG GGGTCGCTAA GATCGACTGG GAGGCGCTCT TGAAGGAGCA GCCTGACGTG
ATCTTCATCG ACTTGGGGAA CTACATGTTT GTAGTGCAGG ACTTTAACAA GAGCCGGGAT
AAGTACTGCG CTCTTAAGGC CTTTAGAGAG GGGAGGGTAT ACGGCATTTT GATGTACAAC
TGGTATGGAA CCAATATCGC TACGCTTTTT GCTGACGCCT ATTTTATGGG TAAGGTGCTT
TATCCTGAGG CGTTTAGGGA TGTGGATCCT GTGGCTAAGG CTGACGAGAT CTATAGGGAG
TTCCTCGGCA CGCCCCTCTA CACGGCAATA GCCAAAGACT TCAAAGGAGG ATTTAGACAG
CTGACAGAAT TCAAATGCGG GTCCTGA
|
|---|
| Protein sequence | MRRAVLIGAL ILVTIAFLLQ IQQPPQKMQE TAATTATPPL KSPEAAAPGA TATKACSGSP
LGYVAPTLVK VVKDAAAAAG LGTEGIQSVG SVEGLRRIQG GAKPDLFGSV DIELRPDAER
AGALQTYSLG RFKLALVCRA PTTLEELASA KTVFPDPNKA PIGYRELAAA WMLSRDLGVN
LTAKYTALGV RFVYNGTLYV YIPSSLPNTE AVDVAPNLDG SWAKFEAGAG RCMFAYVPFL
LGKGLQLRPA GGGTSYWEPY TAEAGGRTYY VYVFKPPYDF AEDPPIKAVA VLLGPPVKTI
RVGHFEAFVA SYTELGNCVI ESLKKMDLSK YGFITTARAT AGASKSAVVE VVDVLGRRVS
VKAPVSRVVA LGPGALRLVV YLNATDKLAG IEEIEKRPPR GRDYGYILWT KNLTSLPVVG
RGGPGSPVDY ERILSVRPDV IIMSPLVADA PDKIQEKTGI PVVVVSAFID SGEGWVNFTS
LYKSLRTVGV LLGREERAEE LVRYMEGLIK DLKRRTANIT QRPKVYVGAI SYKGGQPFEA
TQSYFPPLVL LNTPGVADRY GIKGVAKIDW EALLKEQPDV IFIDLGNYMF VVQDFNKSRD
KYCALKAFRE GRVYGILMYN WYGTNIATLF ADAYFMGKVL YPEAFRDVDP VAKADEIYRE
FLGTPLYTAI AKDFKGGFRQ LTEFKCGS
|
|---|
| |