| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0010 |
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| Symbol | |
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| ID | 4616663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 8263 |
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| End bp | 9234 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639783091 |
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| Product | zinc finger, RanBP2-type |
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| Protein accession | YP_929537 |
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| Protein GI | 119871530 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.431527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAG TAATCCAATG GGTTAACCCC AAGGAGGGCG AGATCATATG GAGATACCCC
GTGGACAGGA TCGAATGGGG GGCCCAGCTC ATCGTCGAGG AGTGGCAGGC AGCTGTCTTC
ATGAGGGACG GCAAGGTCTA CGACGTGTTT AGGGCAGGGA GACACACCTT GACCACCCTC
AACCTGCCCC TCCTCACCCA AGCCCTGAGT AGGGTCGCCG GCTTCGACAA ATCGCCTTTT
GTAGCCGTCG TTATATACGT CTCGCTGAAG CAACACCAGC TCCCCTTCGG CGGGCGGGGG
CAGACGGCGG AGCTCGCCCC CATACAGTTC TACGGCTCCG CGTGGTTCCG CGTCGCCGAC
CCGGCCCTCT TTGTGACCCA GGTGGTGGGG GGCCAGAATA TATACACCAC GGAGGACCTC
CAGAAGTTTC TCAGAGGCTA CTTCAACGAG CTCCTAATGG CCGAGCTCTC CCGCCAGTCC
ATATTCACCA TATACGGCAA CCTCGACCAA GTCAGCTTTA TCGTTAAAAA CGCCATAGAC
CCCCACTTCA GGAGGCTAGG CCTGGAGCTG GTAGACGTCA GGTTTGAAGG CCTAGACGTG
ACCGACCAGG TGTGGAGAGA CCGCCTCTTC TTCATCAGAG CCACGGGGGT AAACCCCGCC
GAGTATCTGA GGATGGAGAC CGTGCAGAAG GCCGCGGCGG AGTTGGGCAA AAGCCCCGGG
GCGGCCGCCG GGACGGGCAT AGTCCTCATA CCGCCCCTCC TCTGGCCTCA GCAACAAGCC
GCGCCGCCGC CCCAGCCGGC GCAGCCCGCC GCTCAGCAGG GCGTGGTCTG CCCCCAGTGT
GGGTATGTCA ACCCGCCGGG GGCTAAATAC TGTATAAACT GCGGCTATAT GCTGGGTAAG
AAGTGCCCCC AGTGCGGCTA CGTAAATCCG CCGGAGGCCA AGTTCTGTAT GAACTGTGGA
GCCAAGTTAT GA
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| Protein sequence | MPQVIQWVNP KEGEIIWRYP VDRIEWGAQL IVEEWQAAVF MRDGKVYDVF RAGRHTLTTL
NLPLLTQALS RVAGFDKSPF VAVVIYVSLK QHQLPFGGRG QTAELAPIQF YGSAWFRVAD
PALFVTQVVG GQNIYTTEDL QKFLRGYFNE LLMAELSRQS IFTIYGNLDQ VSFIVKNAID
PHFRRLGLEL VDVRFEGLDV TDQVWRDRLF FIRATGVNPA EYLRMETVQK AAAELGKSPG
AAAGTGIVLI PPLLWPQQQA APPPQPAQPA AQQGVVCPQC GYVNPPGAKY CINCGYMLGK
KCPQCGYVNP PEAKFCMNCG AKL
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