Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0004 |
Symbol | |
ID | 4618286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 3668 |
End bp | 4570 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639783085 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_929531 |
Protein GI | 119871524 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC TTATCTTCGG AGGCCTCGGC TTTATAGGGG CGAACCTAGC CGAGGCTCTG TCGGAGTATG AGCTGTACGT AGCCCACAGG CCTGGGTCTA GAGAGGCTAA GCCGCAAGTA GCCCGCTTCG TGGCCCAGTA CGCCACCCTT CTGGAGTATA CTGACCCCGC GACGGCGTTT GAAAAGACAA GGCCCCACGT CGTTATAAAC CTCGTGGGGC AGTACTACGG CAGGTCCCAG GAGCTGTGGC AGGCAAACGC CGAGTTCCCC CGCCTCCTCT GCGACGCCGC GAGGAGGGCG GGCTGGCGCG GCAAGGTGGT GCACTTCTCA GCGGCTACTG TCAGAGGGCC CGTGGGGGCC ATAATCGAGG AGGAAGAGCT CCACCTCCAC GGCGTGGTGC CAGACAACGA CTTCGACCGG TCGAAGGCAG CCGGCGAGGA GGCCGTCGCA AATTGCTTCA ACGACTGGGT GATAGTGCGC CCGGCCTTAG TATACGGCAG GTTTAACACA CACCCCGAGT GGGTGACCCT CACGCGGTTT GTCAAAAGGG GGGTCGCCCC CATGTTAAAG GCCAGGGTGT CTGCCATATC TGTCAGAGAG CTGGCCAAGG TGGTGAAGGC GTCGCTGGCC TTGGCCAGGC AGTACTTCTT CGCGACAGAG TGCCAGCCGA GGCCGCTGTC GGAGTTCGTA AGAGCTATCG CAAAGGCCTT GGGAAGGCGT GTGGTTCCAA TCCCAATCCC CACCGCTGTA TTGCACATAG CGGCGTCTCC CGAGTTTAAG AGACACCTCC CCTATCTAGA CAAGGCCTTT AGTTGTGAAA AAATGAGGCG CCTACTCGGC CTAGAGCCCA GGCCTAACTT CGAGACGGAG GTAAGGGAGA TGGTAGAAAG TATCAATGTT TAA
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Protein sequence | MRILIFGGLG FIGANLAEAL SEYELYVAHR PGSREAKPQV ARFVAQYATL LEYTDPATAF EKTRPHVVIN LVGQYYGRSQ ELWQANAEFP RLLCDAARRA GWRGKVVHFS AATVRGPVGA IIEEEELHLH GVVPDNDFDR SKAAGEEAVA NCFNDWVIVR PALVYGRFNT HPEWVTLTRF VKRGVAPMLK ARVSAISVRE LAKVVKASLA LARQYFFATE CQPRPLSEFV RAIAKALGRR VVPIPIPTAV LHIAASPEFK RHLPYLDKAF SCEKMRRLLG LEPRPNFETE VREMVESINV
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