Gene Ping_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3730 
Symbol 
ID4624879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4547272 
End bp4548669 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content43% 
IMG OID639798837 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_945003 
Protein GI119947323 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAG GTAAAATCAT TCAGGTTATC GGTGCTGTTG TGGATGTTGA ATTCCCACAA 
GAAACTGTGC CGAATATATA CAGTGCATTG ATCGTGACTG CAAAGAATCT AACCATGGAA
GTTCAGCAAC AAATTGGCGG CGGCGTTGTA CGTTGTATCG CTATGGGTGC TTCTGATGGT
TTAAGTCGCG GTTTAGATGT CACTGATACA GGTAAACCAA TTACAGTACC CGTTGGTACG
GCAACGTTAG GCCGAATCAT GAATGTACTG GGCGAGCCTA TTGATATGTG TGGTGAAATT
GGTGCAACTG AGCATTATGG AATTCACCGC GAAGCCCCTA CATACGAAGA GCAATCAGCT
TCTGTCGCTA CACTAGAAGT AGGTATTAAA GTTATAGACT TAATATGCCC ATTCTCTAAA
GGTGGTAAAA TCGGCCTATT TGGCGGTGCG GGTGTTGGTA AAACAGTTAA CATGATGGAA
CTTATCAATA ATATCGCTTT AAAACATTCA GGTTTGTCTG TTTTTGCCGG TGTTGGTGAG
CGTACTCGTG AAGGTAACGA TTTCTACTTT GAAATGCAGG AAGCCGGTGT TGTTAACGTT
GAAAAACCTG AGTTATCAAA AGTAGCGATG GTTTACGGTC AAATGAATGA GCCACCAGGA
AACCGTTTAC GTGTTGCCCT GACTGGTTTA ACTATGGCTG AACGTTTCCG TGATGAAGGT
AAAGACGTGT TATTATTTAT TGATAATATA TATCGTTATA CCCTTGCAGG AACTGAAGTA
TCTGCGTTAT TAGGCCGTAT GCCTTCTGCT GTTGGTTATC AACCAACACT TGCGGAAGAG
ATGGGTGTTC TGCAAGAACG TATTACTTCA ACTAAGACGG GTTCTATTAC ATCAATTCAG
GCGGTATATG TACCTGCAGA TGATTTAACG GATCCGGCTC CGGCAACAAC CTTTGCTCAC
TTAGACGCAA CAGTTGTACT TAACCGTAGC ATCGCATCAA TGGGTTTATA CCCGGCGATC
GATCCCTTAG ATTCTACCTC TCGTCAACTT GATCCATTAG TTGTTGGCCA AGAGCACTAT
GATATCGCAC GTGGCGTACA GGGCACCCTG CAACGTTATA AAGAGCTGAA AGATATTATT
GCGATTCTGG GTATGGATGA ATTATCTGAA GACGATAAAC TGGTCGTATC TCGCGCACGT
AAAATCGGCA ATTTCTTAAC TCAGGCTTAT CACGTAGCAG AAGTATTTAC TGGTGATCCG
GGGATGTACG TACCACTTAA AGACACATTA GCTGGCTTTA AAGGGTTACT CGCTGGGGAT
TATGATGATC TTCCTGAGCA AGCGTTCCTA TACATAGGCG CGATTGAAGA AGCTGTTGAA
AAAGCGAAAA AGATGTAA
 
Protein sequence
MSTGKIIQVI GAVVDVEFPQ ETVPNIYSAL IVTAKNLTME VQQQIGGGVV RCIAMGASDG 
LSRGLDVTDT GKPITVPVGT ATLGRIMNVL GEPIDMCGEI GATEHYGIHR EAPTYEEQSA
SVATLEVGIK VIDLICPFSK GGKIGLFGGA GVGKTVNMME LINNIALKHS GLSVFAGVGE
RTREGNDFYF EMQEAGVVNV EKPELSKVAM VYGQMNEPPG NRLRVALTGL TMAERFRDEG
KDVLLFIDNI YRYTLAGTEV SALLGRMPSA VGYQPTLAEE MGVLQERITS TKTGSITSIQ
AVYVPADDLT DPAPATTFAH LDATVVLNRS IASMGLYPAI DPLDSTSRQL DPLVVGQEHY
DIARGVQGTL QRYKELKDII AILGMDELSE DDKLVVSRAR KIGNFLTQAY HVAEVFTGDP
GMYVPLKDTL AGFKGLLAGD YDDLPEQAFL YIGAIEEAVE KAKKM