Gene Ping_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3674 
Symbol 
ID4623508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4486231 
End bp4486815 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content36% 
IMG OID639798788 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_944954 
Protein GI119947274 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTC ACTCTACTAT TAATTCATCT AATTCATCTG ATTCATCTGA TATTAGCCCT 
TCTAATGACA AGGAAAGACC TTTTTTTCTG AAAATAACCT CTTGGTTATC GACAATTTCT
GGTTGGTGTT CAGCATCTAT GACGTTGGCT GCAGTTTTTA TTACTTGCCA AATGATCTTT
GTTAGATTTG TGCTTAATGG CTCTACCACA TGGCAGACCG AAGCTATTAT TTATTTAATT
CTTGGTGCAA CTCTTATTGG TTTACCTTTT GTACAACAAG TACGCGGGCA CGTTAATGTA
GATTTAATCC CCTTGATGTT ACCTTCTCGT GCACGCTATT ACTTGGCGAT TTTTACTTTA
ACTTTATCTG CTGTTGTCAT AGGTACTATG TTTTGGTATA GCTTTGAATA CTGGCACTTA
TTGTTTTCTC GTGGCTGGAC AACAGACAGT GTTTGGGCAG TTAGATTATG GATTCCACAT
TCATCGATGA TCATTGGTTT TGGTTTACTT TTTTTACAAT TAGTTGCCGA TTTAGTTGCT
GTTTTATTAA AAATTGATAA ACCTTTTGGG TTGGGAGAAA ACTAA
 
Protein sequence
MTVHSTINSS NSSDSSDISP SNDKERPFFL KITSWLSTIS GWCSASMTLA AVFITCQMIF 
VRFVLNGSTT WQTEAIIYLI LGATLIGLPF VQQVRGHVNV DLIPLMLPSR ARYYLAIFTL
TLSAVVIGTM FWYSFEYWHL LFSRGWTTDS VWAVRLWIPH SSMIIGFGLL FLQLVADLVA
VLLKIDKPFG LGEN