Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3673 |
Symbol | |
ID | 4623507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4484915 |
End bp | 4486231 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798787 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_944953 |
Protein GI | 119947273 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCTC TAATTCTTAG TGCCTTGGTC GGTATAACGA CCATTCTTAT ATTGTTTTCT GGTGTATCTG TTGGTATTGG TTTGCTCGTA GTTTCAGGAT TATTTTTGAT TGTTTTTGAT GGATTACAGT CGTTACAGCT AATGCCAGAA ATATTTTTTG GCAAATTGGA TAGCTTTGCT CTTTTATCAA TCCCTATGTT TATTCTCATG GGATCGACTA TATCCTCTAC AAAAGCAGGC GCTGATTTGT ATGAAGCGCT AGAGCGATGG TTAACAAGAG TTCCCGGTGG TTTAGTGGTA TCAAATTTGG GGGCTTGTGC TCTGTTTGCT GCTATGTCCG GTTCTAGCCC TGCCACTTGT GCAGCGATTG GGAAAATGGG TATTCCTGAA ATGCTTAAGC GAGGTTATCC TGAAGGAATT GCAACCGGAT CAATTGCTGC CGGTGGTACA TTAGGAATTT TAATTCCTCC ATCAGTCACC ATGATTGTTT ATGGCATTGC AACAGAGACA TCAATTGGTC GTTTATTTCT TGCAGGAGTG CTGCCTGGCC TGATGCTTGT GGGATTGTTC ATGGCTTGGT CTATATACGC AACTTGGCGT TCAGGTAACC GTGCGTTAAT GACACCAATC AATTATAGCT GGCGAGAAAA ATTCGAAATA CTGCCTCGTG TATTACCATT TGTTGGCATT ATTATTGCTG TGCTTTATAC CATGTATGGC GGTATTGCAA CGCCATCTGA AACAGCAGCT CTGGGCGCAA TAATGTGCTT AGTTGTTGCG ATGATTATTT ATCGTTTAAC TAGTCCGAAA GATTTGTGGA CAATATTGCG CGATAGCACC AGAGAGAGCG TAATGATTTT ATTTATCATT GCAGCAGCGG GCGTTTTTTC TTATATGTTG TCTAGCCTTT ATATTACTCA AGCAATAGCT GAGTGGATTG GAGCACTAGA AATTAATCGT TGGAGTTTAA TGATTTTAAT TAATTTCTTT TTGATTATAG CGGGATTCTT CCTCCCTCCG GTAGCAGTAA TTTTAATGAC AGCCCCTATT TTGTTGCCTG TGCTTATGAA TGCTGGCTTT GACCCTATCT GGTTTGCTGT AGTCCTTACC ATCAATATGG AAATTGGTTT AATTTCACCA CCAGTCGGTT TAAATCTTTA TGTGATTAAT GGCATTACTC CAAACATTTC TTTGAAAACT ATTCTGTGGG GTTCATTACC TTTTGTTGCC TGCATGATTA TTGCCATTGT TTTACTCTGC TTGTTCCCTA GCATTGCTAC ATGGCTACCT GAGGCCGTAA TGGGCTCAGC TATATAA
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Protein sequence | MDPLILSALV GITTILILFS GVSVGIGLLV VSGLFLIVFD GLQSLQLMPE IFFGKLDSFA LLSIPMFILM GSTISSTKAG ADLYEALERW LTRVPGGLVV SNLGACALFA AMSGSSPATC AAIGKMGIPE MLKRGYPEGI ATGSIAAGGT LGILIPPSVT MIVYGIATET SIGRLFLAGV LPGLMLVGLF MAWSIYATWR SGNRALMTPI NYSWREKFEI LPRVLPFVGI IIAVLYTMYG GIATPSETAA LGAIMCLVVA MIIYRLTSPK DLWTILRDST RESVMILFII AAAGVFSYML SSLYITQAIA EWIGALEINR WSLMILINFF LIIAGFFLPP VAVILMTAPI LLPVLMNAGF DPIWFAVVLT INMEIGLISP PVGLNLYVIN GITPNISLKT ILWGSLPFVA CMIIAIVLLC LFPSIATWLP EAVMGSAI
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