Gene Ping_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3668 
Symbol 
ID4623502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4481273 
End bp4482076 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content42% 
IMG OID639798783 
Productintegrase catalytic subunit 
Protein accessionYP_944949 
Protein GI119947269 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGTA GTGCATTTTA TGATTGGCTT GAACGGCCAG TTAAAATAAA TAGTGAAGAA 
GAGCTGAATA TGTACCGTAC GGCGCGTCAG CTATTTAAAC GCAGTCGTGG CAGTTTAGGC
TCTCGCCAGT TGTGCAAGAA CTTGAGACGA GCGGGTTTTA ATGTGGGCCG TTACTGTACG
CGCAGCATCA TGCGTAAGCT GAAACTTGTG GTGACCCAAC GCCAGGCATA TAAAGTAACA
ACAAAGCGTA AGCATAGTAA TAGCGTTGCT GATAACGTAT TAAACCAGCA GTTCAATCCC
GCACAGGTAA ACTTGGTTTG GGCGGGTTAT GTAACGTATT TGAGAACCAA TCAAGGCTGG
ATGTATTTAG CCATTGTCAT GGACTTATAC TCCCGCAGGG TTGTCGGTTG GTCTATCTCG
AAACGTATGA CTGTTGATTT AGTTGAACGC GCATTACAAA TGGCGATTAA CATCAGGGAA
CCTAAAGCTG GATTAATGTT CCATAGTGAT AGAAGCGCTC AATATACTAG CGGGCGATTT
AGTCGATTGC TGAACAAGTA TAAAATAACA GCCTCAATGA GCAGTGTCGG TGCTTGTTTA
TATAACGCTG TTGTAGAACG ATTTTTTGGC AGTTTAAAGA ATGAATGGTT ATTAAATGTT
GTGCATTTAA CACGTGAAAT GATGAAGATG GATGTTGAAG AATATATCCG TTATTACAAC
CATGAACGAC TTCATACAAC ACTCGGTGAT TTAACGCCGA TTAACTATGA AAATTTACAA
AGTCAGGTGT CCGGTTGGAC TTGA
 
Protein sequence
MSRSAFYDWL ERPVKINSEE ELNMYRTARQ LFKRSRGSLG SRQLCKNLRR AGFNVGRYCT 
RSIMRKLKLV VTQRQAYKVT TKRKHSNSVA DNVLNQQFNP AQVNLVWAGY VTYLRTNQGW
MYLAIVMDLY SRRVVGWSIS KRMTVDLVER ALQMAINIRE PKAGLMFHSD RSAQYTSGRF
SRLLNKYKIT ASMSSVGACL YNAVVERFFG SLKNEWLLNV VHLTREMMKM DVEEYIRYYN
HERLHTTLGD LTPINYENLQ SQVSGWT