Gene Ping_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3614 
Symbol 
ID4625128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4430084 
End bp4430986 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content41% 
IMG OID639798730 
Productsugar nucleotide epimerase 
Protein accessionYP_944896 
Protein GI119947216 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG GTAAAGTGCT GCTAACCGGT TCATCTGGTT TGGTTGGAAC GGCTTTAAGT 
GAGCTTTTGA AATCACAAGG TTATCAGGTT GGTAGATTAT TGCGCAGCGA TCAGCCGGGG
GAACCCTATT GGGATATTAA GCAGCACTAT TTTGCACTTA AGGATTTTGA AAATCCCGAT
GTAATTATTC ATTTAGCGGG TGAAAATATT GGTGACGGGC GATGGACAAA GGACAAAAAA
AAGAAACTGA GAGACAGTCG TATTCTATCT ACCCAATTAC TGGTCGAACA TTTTAAAAAA
GTCCTGCCGC CGCCTAAACT TTTTATCTGC GCTTCGGCAA TCGGTTTTTA TGGTAATAGA
GGTGATCAAA AGCTTGATGA AAATAGTGCA GCCGGTGCTG ATTTTGTCAG TCAATTAGCA
CTTGATTGGG AAGAAAGTAG CCAAGGAATT AAAGAGGCTG GCACTAGGCT GGTTAATCTG
CGCACTGGTA TCGTTATCAG TGAAAAAGGC GGTGCATTGG CGAAAATGTT ACCAGCTTTT
AAACTGGGTT TAGGTGGAAA AATTGGCTCT GGTGAGCAAA TAATGAGTTG GATTGACATT
AACGATATGA TCCGCGCTAT TTTATTTATT ATTGAAAATG AGAATCTTCA AGGCCCGGTA
AATTTGGTCT CTCCAAATCC TGTGACTAAC CAGATATTTA GCCAACTGCT GGCAAAACAG
TTAAATCGTC CCTGCTTTTT TCCCTTGCCT GAGGGCATGG TTAAATTGCT GTTTGCTGAA
ATGGGTAAGG AATTATTGCT TTCAAGTACG CGGGTCAACC CTAAAAAGTT GCTTGATGCT
GATTTTGTAT TTAAATATGC CAAGTTAGAA GAGAGTTTTC TCCAGCAGTT TGGGGGTAAA
TAA
 
Protein sequence
MDKGKVLLTG SSGLVGTALS ELLKSQGYQV GRLLRSDQPG EPYWDIKQHY FALKDFENPD 
VIIHLAGENI GDGRWTKDKK KKLRDSRILS TQLLVEHFKK VLPPPKLFIC ASAIGFYGNR
GDQKLDENSA AGADFVSQLA LDWEESSQGI KEAGTRLVNL RTGIVISEKG GALAKMLPAF
KLGLGGKIGS GEQIMSWIDI NDMIRAILFI IENENLQGPV NLVSPNPVTN QIFSQLLAKQ
LNRPCFFPLP EGMVKLLFAE MGKELLLSST RVNPKKLLDA DFVFKYAKLE ESFLQQFGGK