| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3612 |
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| Symbol | |
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| ID | 4625126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4426636 |
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| End bp | 4428003 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798728 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_944894 |
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| Protein GI | 119947214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAG CTATTGATAC AATTGTTGCT CAAGCAACCG CACCCGGTCG TGGTGGTGTT
GGTATTATTC GCATTTCAGG GCCAGATGTA GAAGCGGTCG CAAAAGTTAT TTTAGGAAAA
GTCCCTAAAC TGCGTTTTGC CGAATATTTA TCCTTTAGCG ATCAGCATAA TGAAGTGCTG
GATCAAGGTA TCGCCCTGTT TTTTAAAGCG CCCAATTCAT TTACAGGTGA AGATGTACTG
GAACTCCAAG GGCATGGTGG TCCGGTGGTG ATGGATATGC TTATTAAGGC AATTTTAAGC
ATAAAAAATC TTCGTGGAGC CAATCCTGGA GAGTTTTCAG AACGTGCATT TATGAATGAT
AAACTCGATT TGGCACAAGC TGAAGGGATT GCTGATTTAA TTGAAGCAAC CTCAGAACAA
GCCGCTAAAA GTGCGCTGCA CTCTTTACAG GGTGAATTTT CAGAGAAAAT AGAGCAGCTT
GTTGAAAGCC TTATCTATTT ACGCATTTAT GTTGAAGCCT CTATTGATTT CCCTGAAGAG
GAAGTCGATT TCTTAAGTGA CGGTAAAATT TCTAAAGGTT TATACCAAAT AATTGATAAT
CTGGAAGCGG TAAAAAAGCA GGCCAAACAG GGCGCTATTT TACGTGATGG CATGAAGGTT
GTTATTGCAG GACGACCCAA TGCCGGTAAA TCAAGTTTAT TAAACAGCCT GGTGGGTGTC
GAGCGCGCCA TAGTGACCGA CATTGCCGGT ACCACCCGTG ATGTGATGCG CGAACATATT
CACATAGATG GTATGCCATT ACATATTATT GATACTGCGG GTCTGCGTGA AGGTGCGGAT
GAAATTGAAA AAATAGGCAT TGAGCGTGCC TGGCAGGAGA TAACAACAGC GGATCGTATC
CTTTTTATGC TTGATGCCAC CACCACCAGT GCTGAAGATC CTCGTCAAAT TTGGCCAGAT
TTTATTGATA AGCTGCCCAA ATCTGTAGGT TTAACCGTCG TACGTAATAA AGCGGATCTG
ACTGGAGAGG CCTTCTCTAT GACTGAAAAC CATGATCACC CCGTTTATCG TATTTCAGCG
AAAACCGGCC AGGGGGTGGA CTTATTAAAA GAACATCTTA AAGATATTAT GGGTTATCAG
GGCCATACCA CCAGTGGTTT TATGGCAAGA CGTCGCCATT TAGAGGCCAT TGATAACGCA
CAGCGTCATT TGCTGGAGGG CAAAGTCCAA CTGGAAGAGT ATAAAGCGGG TGAATTATTA
GCCGAAGAGT TAAGATTAAC CCAACAATAC CTGAGTGAAA TTACCGGCGC ATTCAGTTCC
GATGATCTGC TTGGCAAAAT TTTCTCAAGC TTCTGTATTG GCAAATAA
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| Protein sequence | MIKAIDTIVA QATAPGRGGV GIIRISGPDV EAVAKVILGK VPKLRFAEYL SFSDQHNEVL
DQGIALFFKA PNSFTGEDVL ELQGHGGPVV MDMLIKAILS IKNLRGANPG EFSERAFMND
KLDLAQAEGI ADLIEATSEQ AAKSALHSLQ GEFSEKIEQL VESLIYLRIY VEASIDFPEE
EVDFLSDGKI SKGLYQIIDN LEAVKKQAKQ GAILRDGMKV VIAGRPNAGK SSLLNSLVGV
ERAIVTDIAG TTRDVMREHI HIDGMPLHII DTAGLREGAD EIEKIGIERA WQEITTADRI
LFMLDATTTS AEDPRQIWPD FIDKLPKSVG LTVVRNKADL TGEAFSMTEN HDHPVYRISA
KTGQGVDLLK EHLKDIMGYQ GHTTSGFMAR RRHLEAIDNA QRHLLEGKVQ LEEYKAGELL
AEELRLTQQY LSEITGAFSS DDLLGKIFSS FCIGK
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