| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3544 |
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| Symbol | |
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| ID | 4625258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4361525 |
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| End bp | 4362829 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639798660 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_944826 |
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| Protein GI | 119947146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.326027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.804192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAC TGATTATTGG AGGCATACTT CTGGTTGTGC TGTTTGGTTT TCTTGCCAGC
GGACTGTGGG TGGCTTTGTC ACTGCTGATG GTGGCTATCT CAGGTATGAT CCTGTTAGGT
AACGACGCCT TTGGTTTGAT TTATGCAACC TCCACCTGGG GCGCGGTGTC TGACTGGTCA
CTCGCAGCTT TGCCGTTGTT TATCTGGATG GGGGAAATTC TATTCAGAAC CCGTTTGTCC
AGTGACCTGT TCGAAGGGTT AACACCCTGG CTGGGGCGAG TACCCGGTCG CCTGTTACAT
GTAAATATTT TAAGTTGCGG TCTATTTGCC GCAGTGTCCG GATCATCGGC TGCAACGGCG
GCGACAATCG GTAAAATGAC ACTGCCTGAG CTCAAAAAGC AGGGCTACGA TGATAAAATG
GCGATTGCAA CACTGGCAGG TTCAGGAACA CTTGGTCTTT TAATTCCACC GTCGATTATT
TTGATTGTTT ATGGTGTGGC CGCAGAGGTT TCTATTGGCC GTTTATTTAT TGCAGGTGCC
GTGCCCGGTC TGATGCTGGT AATGCTGTTT ATGGGATATA CCATGTACTG GGCATTGCGC
AATCCGAGCA AAGTACCTAG CGACACAGTT ACCTACAGCT GGTCTGTAAA GTTGAAAGCC
CTGCTCAAGC TTATTCCTGT TGGGCTTCTG GTCTTATTTG TTCTGGGTTC TATTTATGGT
GGTCTAACAA CTCCGACTGA GGCTGCGGCT TTTGGGGTCG TTGGCGCACT ATTGCTTGCT
TTTACTGGTC GCTCCCTGAC TCGGGAAAGT CTGGTTGGCA GCTTAATGGG GGCGACAAAA
ACCTCATGCA TGATTCTTTT AATTCTTGCC GGTGCGGCAT TTTTAACCGT TGCAATGGGT
TTTATTGGGT TACCCCGTAT GCTGGCAGAA ACTATCGCTG CAATGGAGCT TTCACCTTAT
CTACTGCTGT TTATTTTGAC CTTGTTGTTT GTGGTGCTGG GCTGTTTCTT AGACGGCATT
TCTGTTGTTG TCCTGACCAC CTCAGTGGTT TTACCTATGG TGCTGCAGGC CGGAATTGAT
CCGCTGTGGT TCGGTATTTA TATTGTGCTG GTTGTTGAAA TGTCACAAAT CACTCCGCCC
GTCGGTTTTA ACTTATTTGT CCTTCAAAGC CTCACCGGGC GTGATATGAT CTTTATCTCA
AAGGCTGCGC TACCGTTTTT CTTCTTATTA CTTTTCGCGG TAGTAATAGT CACAGTATTT
CCGGGTATTG TCACCTGGCT ACCATCGGAA ATGACCGCCA GTTAA
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| Protein sequence | MNELIIGGIL LVVLFGFLAS GLWVALSLLM VAISGMILLG NDAFGLIYAT STWGAVSDWS
LAALPLFIWM GEILFRTRLS SDLFEGLTPW LGRVPGRLLH VNILSCGLFA AVSGSSAATA
ATIGKMTLPE LKKQGYDDKM AIATLAGSGT LGLLIPPSII LIVYGVAAEV SIGRLFIAGA
VPGLMLVMLF MGYTMYWALR NPSKVPSDTV TYSWSVKLKA LLKLIPVGLL VLFVLGSIYG
GLTTPTEAAA FGVVGALLLA FTGRSLTRES LVGSLMGATK TSCMILLILA GAAFLTVAMG
FIGLPRMLAE TIAAMELSPY LLLFILTLLF VVLGCFLDGI SVVVLTTSVV LPMVLQAGID
PLWFGIYIVL VVEMSQITPP VGFNLFVLQS LTGRDMIFIS KAALPFFFLL LFAVVIVTVF
PGIVTWLPSE MTAS
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