| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3488 |
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| Symbol | |
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| ID | 4625522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4316493 |
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| End bp | 4317893 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798604 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_944770 |
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| Protein GI | 119947090 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.934178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0666939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAG CTTGGATTGT GGATGATGAC CACGCTATTC GTTGGGTTTT AGAACGTACT
CTAAAAGCTG AAAAGATTGA CTATGCCAGT TTCCCCGATG GGGAATGTTT ATGGCAACAG
TTACAAATAG AGCAGCCTGA GGTCATTATT TCCGACATAC GGATGCCGGG TATAGATGGA
CTTGCTTTAA TGGAACGTAT TCATGGACGC TTTCCATTAA TTCCAATTAT TATAATGACC
GCACACAGTG ATTTAGACAG TGCAGTTAAT GCCTACCAAA GTGGCGCCTT TGATTACCTA
CCAAAACCCT TTGATATTCA TGAAGCCACG GCTTTAATTC AACGCGCAAT TAACCATAGC
ATTGAATTAA AAAACAAAAA AAAGGTCCCG GAATTACTTA TTGCTACACC GGAAATTATT
GGTGAAGCAC CGGCAATGCA GGAGGTGTTC CGCATTATTG GGCGTTTATC TCATTCAAGT
ATGAGTGTAT TAATCAATGG TCAATCCGGT ACCGGTAAAG AGTTGGTTGC GAAGGCTTTA
CATAAACACA GCCCACGCAA AGATAAGACC TTTATCGCCC TGAATATGGC CGCTATTCCC
AAAGAGTTGA TCGAAGCTGA ACTCTTTGGT CATGAAAAAG GGGCGTTTAC CGGTGCGGCT
GCAAATCGTC AAGGCCGGTT TGAGCAAGCT AATGGCGGGA CTCTTTTTTT AGATGAAATT
GGTGATATGC CATTAGATGT GCAAACCCGT TTATTACGAG TGCTCGCGGA TGGTAAATTT
TACCGGGTGG GCGGCCATCA AGGGATCGAA GTCGATGTGC GCATTATTGC AGCTACTCAC
CAAAATTTAG AAAAAAGTGT GCAATCAGGT AGTTTCCGGG AAGATCTTTT CCACCGTTTA
AATGTCATTC GTATCCAACT CCCCGCTTTA AAAGAGCGTT GTGAAGATAT TAGTTTATTG
GCACAACATT TTTTAAATAA TATTGGCAAA GAGTTAAATG TCAAAAGCAA GCAATTTACA
AAGGAGACAA AAGAGTATTT AACGCAACTG CCTTGGCCGG GAAACGTACG TCAACTGGAA
AACGTTTGCC GCTGGGTGAC GGTAATGACC AGCGGGCAGG AAGTCCATAT TTACGATTTA
CCACCGGAAT TAACCGCCCA AGAAACACAA GCTACTGATG ATGAAAATCC GCATTGGCAG
AAACAGTTAC GCGAATGGAC CTTAGCTGAA TTAAAACAGG GCAAAGAGAA TATACTTGCC
AATGCCCTGC CGGAATTCGA AAAAATAATG TTGCAGGCTG CATTGCAGTA CACTCAAGGC
AAACGACAGG AAGCCGCAAC ACTGCTTGGT TGGGGTAGAA ATACGCTGAC CCGTAAATTA
AAAGAGTTTG ATATCTCCTA A
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| Protein sequence | MPSAWIVDDD HAIRWVLERT LKAEKIDYAS FPDGECLWQQ LQIEQPEVII SDIRMPGIDG
LALMERIHGR FPLIPIIIMT AHSDLDSAVN AYQSGAFDYL PKPFDIHEAT ALIQRAINHS
IELKNKKKVP ELLIATPEII GEAPAMQEVF RIIGRLSHSS MSVLINGQSG TGKELVAKAL
HKHSPRKDKT FIALNMAAIP KELIEAELFG HEKGAFTGAA ANRQGRFEQA NGGTLFLDEI
GDMPLDVQTR LLRVLADGKF YRVGGHQGIE VDVRIIAATH QNLEKSVQSG SFREDLFHRL
NVIRIQLPAL KERCEDISLL AQHFLNNIGK ELNVKSKQFT KETKEYLTQL PWPGNVRQLE
NVCRWVTVMT SGQEVHIYDL PPELTAQETQ ATDDENPHWQ KQLREWTLAE LKQGKENILA
NALPEFEKIM LQAALQYTQG KRQEAATLLG WGRNTLTRKL KEFDIS
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