Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3457 |
Symbol | |
ID | 4625575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4275862 |
End bp | 4277388 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639798573 |
Product | nucleoside-diphosphate-sugar epimerase |
Protein accession | YP_944739 |
Protein GI | 119947059 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.291016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0152952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG TATTAACAGG CTCTACAGGT TTTCTTGGTA AGGAGTTATT AACTAAACTT GCAAATGAGC CTGTTGAATT AATTCAAATT GGCCGTAACG AATATAACAA AAATAATCCT CATTATATTT ATATCAAGGG TCTTGATTCA GCTTCTCAGT TTAATTTAGC CATTTATAAA TGTGATGTTG TCATCCATTG CGCTGCCCGT GTGCATATTA TGGATGATGA TTCAGCTAAT CCATTAGAAG ATTTTCGTGA AGTAAATAGC CACGGCACAC TCAACCTTGC TCAGCAGGCT GCGGATGCCG GGGTTAAACG TTTTATTTTT ATTAGCTCTA TTAAAGTAAA CGGTGAATCT ACCGAAACGG TTGCCCCTTT CAAACCTGAT ACTGATTTTG TCCCGACTGA TCCCTACGGG CTGAGTAAAT ATGAGGCAGA AGTGGGTTTA CGCAAAATAG CAGAACAGAC CGGCATGGAG GTAGTGATTA TTCGTCCTAC TTTGGTTTAT GGTCCGGGAG TTAAAGCTAA TTTTGCAGCA ATGATGAAAT GGGTGAATAA AGGCGTTCCT CTGCCTTTAG GTGGTATTAC CGATAATCGA CGCAGTTTAG TATCAATAGA TAATTTGGTT GATTTAATTA TCATTTGCAT TGAACACCCG AATGCAGCGA ATCAAACATT TTTAGTCTCC GATGATGATG ATATGTCGAC ATCTAAATTA CTTGTCCGTA TGGCGACCGC ATTGGATGTG CCCAATAGAA TGTTACCTAT TTCGAGTTCC TGGTTGACGT TAGCAGCTAA GTTAATTGGA AAACCGGCAA CAGCACAGCG GCTATGTGGC TCTTTGCAGG TTGATATATC TCAAACTAAA GAACTGTTAA ACTGGAAGCC GCCCTACAGC ACTCCTGAAT GTTTAAAAAA AACAGCGGAT GCTTTTCTTT ATACCTCTGC ACAAGTCACA AATAATATGA ATTCTTTTAC CATTCGAACA TTAGATTTTT TAATGGCTTT TTTGGGCCTG TTCGTCACTT TCCCCATTTT ATTGATCGTT ACTATTATCG GTTATTTTGA TACTGGTGCG CCTATTTTTA TTCAGCAGCG TGTGGGCAAA AATAAACGCC CATTTAACTT AATTAAATTC CGTACTATGT CGGTTGATAC CAAGTCGGTT GCCAGCCATT TAGCAAGCAC TGCTTCAATT ACTAAGCTAG GTTCTTTTTT ACGTAAATCA AAATTTGATG AGATTCCACA GTTAATTAAT GTGCTGAAGG GGGAGATGAG TTTTGTCGGG CCTCGCCCTA ACTTGTTTAA TCAGGGAGCG TTAATTATCG AGCGTGAGAG TCGTGGCGTG TACGATGTTT TGCCTGGTAT TACTGGCCTT GCGCAGGTGA ATACTATCGA TATGTCAACG CCTCAATTAT TGGCTGAAAC CGATCAAAAA ATGATTCAAA CCATCACTCT TAAAAACTAT TTCCAATACA TTATTAAAAC AGCAACAGGC AGTGGTTCGG GTGATCGGGT GAAATAG
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Protein sequence | MKIVLTGSTG FLGKELLTKL ANEPVELIQI GRNEYNKNNP HYIYIKGLDS ASQFNLAIYK CDVVIHCAAR VHIMDDDSAN PLEDFREVNS HGTLNLAQQA ADAGVKRFIF ISSIKVNGES TETVAPFKPD TDFVPTDPYG LSKYEAEVGL RKIAEQTGME VVIIRPTLVY GPGVKANFAA MMKWVNKGVP LPLGGITDNR RSLVSIDNLV DLIIICIEHP NAANQTFLVS DDDDMSTSKL LVRMATALDV PNRMLPISSS WLTLAAKLIG KPATAQRLCG SLQVDISQTK ELLNWKPPYS TPECLKKTAD AFLYTSAQVT NNMNSFTIRT LDFLMAFLGL FVTFPILLIV TIIGYFDTGA PIFIQQRVGK NKRPFNLIKF RTMSVDTKSV ASHLASTASI TKLGSFLRKS KFDEIPQLIN VLKGEMSFVG PRPNLFNQGA LIIERESRGV YDVLPGITGL AQVNTIDMST PQLLAETDQK MIQTITLKNY FQYIIKTATG SGSGDRVK
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