Gene Ping_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3438 
Symbol 
ID4625592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4250713 
End bp4252806 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content45% 
IMG OID639798555 
Producttranslation elongation factor G 
Protein accessionYP_944721 
Protein GI119947041 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000152425 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000196406 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCACGTA CAACTCCTAT CGAGCGCTAC CGAAACATTG GCATTGTTGC TCATGTCGAT 
GCGGGTAAAA CAACAACGAC AGAGCGTGTA TTGTTCTACA CAGGTGTATC TCACAAAATG
GGTGAGGTAC ATAATGGTGC AGCAACAATG GACTGGATGG AGCAGGAGCA GGAGCGTGGT
ATCACTATTA CCTCCGCCGC GACGACGACA TTCTGGTCAG GCATGCAGGG ACAGTACGAA
CAACACCGTA TCAATATTAT TGATACTCCA GGACATGTTG ATTTCACTAT CGAAGTTGAA
CGTTCATTAC GAGTCTTAGA TGGTGCGGTT GTGGTGTTTT GCGCCTTGTC CGGTGTTGAA
CCTCAATCAG AAACCGTTTG GCGTCAAGCT AACAAATACC ACGTTCCGCG TATTGTATTT
GTGAATAAGA TGGATCGGAC AGGTGCTGAT TTTGAAGCTG TAGTTGCACA AATCCAAGCT
CGTTTAGGCG CAATTTGTGT TCCAATTCAT TTGAATATTG GGGCAGAAGA TGAGTTTAAA
GGTGTCATCG ACCTGATTAA AATGAAGGCG ATTAATTGGA TCGATACAGA TCAGGGAATG
ACCTTTGAAT ATTACGACAT TCCAGCTGAT CTACAGGAGC GTGCAGAGCA ACTGCACGAA
GAACTTGTAG AAGTAGCGGC TGAAGCAAAC GACTTTCTGA CGGAAAAATA CCTTGAAGAA
GGTGCTCTTT CTATCGAGGA AATCAAAGCT GGTTTACGTA TCCGTACGTT AAACAATGAA
ATTGTACTGG CAACCTGCGG CAGCGCTTTT AAAAATAAAG GTGTGCAGTC GGTGTTAGAT
GCTGTTATTG ACTTTCTTCC TTCTCCTTCG GAAGTTGCCG CAATTAAAGG CATGGATGAA
AAAGAGAATG AAGTTGAATG TCCAGCGACT GATGAAGCTC CCTTTGCTGC ATTGGCGTTT
AAAATTGCAA CGGATCCCTT TGTGGGAACG TTAACATTTA TGCGCGTATA TTCAGGGGTG
GTTAATTCAG GGGATCATGT TTATAACTCA GTGAAAATGA AGAAAGAGCG TTTTGGCCGT
ATCGTTCAGA TGCATGCCAA TGACCGTAAA GAGATCAAAG AGGTGCGCGC CGGTGATATC
GCTGCTGCAA TCGGCCTTAA AGATGTTACT ACGGGCGATA CGCTTTGTTC TCCTGAGCAT
AAAGTGATTC TTGAGCGCAT GGAGTTTCCT GAACCGGTAA TTCAAATCGC GGTTGAGCCT
AGAACGAAGG CCGACCAAGA TAAACTGACT ATCGCATTAG AGAAGCTGGC TGCTGAAGAT
CCCTCTTTCC GTGTTGAAAC GAATGAGGAA TCCGGGCAGA TCCTGATCTC CGGTATGGGT
GAACTTCACC TGGATATTAT CGTGGATCGT ATGCGTCGTG AGTTTGGTGT GAACTGTAAC
GTGGGTCATC CACAAGTAGC GTATCGAGAA ACTATCCGTA AAACGGTTTC AGTGGAAGGG
AAATTTATTC GTCAGGGCGA AGGACCTAGC CATTATGGGC ATGTCCATCT TAAACTTGAA
CCGCTTAAAC CAGGTTCTGG CTTTGAATTT GTTAACGAAA TTGTCGGAAA AACTATTCCA
AAGGAATATA TCCCGGCCGT TAGCAAAGGC TGTGAAGAAC AAATGAACCA AGGTGTGCTT
GCTGGATACC CAATGCTGGA TGTGCGAGTG ACTTTATTTG ATGGTTCATT CCATGAAGTT
GACTCAAGTG AGATGGCATT TAAGATTGCA GGTATGATAG GCTTTAGAAA CGGGGCATTA
CAAGCTGATG CGACTATTCT TGAGCCTGTT ATGAATGTTG AAGTAACTAC GCCGGAAGAT
TGGATGGGTG ATGTTGTGGG TGACCTTAGT CGTCGCCGCG GTATGATTGA AGGTATGGAT
GATGGCCTTG GCGGCGTTAA AATCGTGCAT GCTAAAGTAC CGCTTGCTGA GATGTTCGGT
TATGCAACCG CATTACGCTC GGCAACTCAG GGACGCGCAT CTTATTCAAT GGAGTTTTCA
GAATATGCGG ACGCGCCTAA AAAAATAGCT AACGCAATTA TTGAAGCGAA ATAA
 
Protein sequence
MSRTTPIERY RNIGIVAHVD AGKTTTTERV LFYTGVSHKM GEVHNGAATM DWMEQEQERG 
ITITSAATTT FWSGMQGQYE QHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCALSGVE
PQSETVWRQA NKYHVPRIVF VNKMDRTGAD FEAVVAQIQA RLGAICVPIH LNIGAEDEFK
GVIDLIKMKA INWIDTDQGM TFEYYDIPAD LQERAEQLHE ELVEVAAEAN DFLTEKYLEE
GALSIEEIKA GLRIRTLNNE IVLATCGSAF KNKGVQSVLD AVIDFLPSPS EVAAIKGMDE
KENEVECPAT DEAPFAALAF KIATDPFVGT LTFMRVYSGV VNSGDHVYNS VKMKKERFGR
IVQMHANDRK EIKEVRAGDI AAAIGLKDVT TGDTLCSPEH KVILERMEFP EPVIQIAVEP
RTKADQDKLT IALEKLAAED PSFRVETNEE SGQILISGMG ELHLDIIVDR MRREFGVNCN
VGHPQVAYRE TIRKTVSVEG KFIRQGEGPS HYGHVHLKLE PLKPGSGFEF VNEIVGKTIP
KEYIPAVSKG CEEQMNQGVL AGYPMLDVRV TLFDGSFHEV DSSEMAFKIA GMIGFRNGAL
QADATILEPV MNVEVTTPED WMGDVVGDLS RRRGMIEGMD DGLGGVKIVH AKVPLAEMFG
YATALRSATQ GRASYSMEFS EYADAPKKIA NAIIEAK