Gene Ping_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3437 
Symbol 
ID4625591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4249454 
End bp4250638 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content44% 
IMG OID639798554 
Productelongation factor Tu 
Protein accessionYP_944720 
Protein GI119947040 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000112361 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000128836 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTAAAG CAAAATTTGA ACGTAAAAAA CCACATCTAA ACGTTGGTAC AATCGGCCAC 
GTCGATCATG GTAAAACAAC GCTAACAGCT GCTATCTCTG CTGTTTTAAC TAAAGCACAC
GGCGGTGAAG TTAAAGATTT CGCATCTATC GATAACGCAC CTGAAGAGCG CGAACGTGGT
ATTACAATCA ATACCTCTCA CATCGAGTAC GATACTGATA CGCGTCATTA TGCACACGTA
GACTGTCCTG GACACGCCGA TTACGTTAAA AACATGATCA CTGGTGCTGC ACAAATGGAT
GCTGGTATCC TTGTTGTTGC TGCAACTGAT GGTCCTATGC CACAAACGCG TGAGCACATC
CTACTTTCTC GTCAAGTTGG TGTTCCTCAC TTAATCGTGT TCATGAACAA ATGTGACATG
GTTGATGATG AAGAGCTACT TGAACTAGTA GAAATGGAAG TTCGTGAACT TCTTTCTGAA
TATGACTTCC CAGGTGATGA CTTACCAGTT ATCCAGGGTT CTGCTCTTAA AGCACTTGAA
GGCGACCCAG TATGGGAAGC TAAAGTTATG GAACTTGCTG ACGCTCTTGA TACTTATATC
CCGCTTCCTG AGCGTGATAT CGACAAACCA TTCATCCTAC CAATTGAAGA TGTATTCTCA
ATTGCTGGTC GTGGTACTGT TGTTACTGGT CGTGTTGAGC GCGGTATCAT CAAAGTTGGT
CAAGAAGTTG AAATCATTGG TCTACGTCCA ACAGTTAAAA CTACTTGTAC TGGTGTTGAG
ATGTTCCGTA AACTGCTTGA CGAAGGTCGT GCTGGTGAGA ACGTTGGTAT CCTTTTACGT
GGTACTAAAC GTGATGACGT TGAACGTGGT CAAGTTCTTG CTAAACCTGG TTCAATCAAG
CCACACACTA AATTTGAAGG CGAAGTGTAC ATCCTAAGTA AAGATGAGGG TGGTCGTCAC
ACTCCTTTCT TTAAAGGTTA CCGTCCACAG TTCTTCTTCC GTACAACAGA CATCACAGGT
GCTGTTGAGC TTCCTGAAGG TGTTGAAATG GTAATGCCTG GTGATAACCT TAAGTTTGTT
GTTGACTTAA TTGGTCCAGT TGCTATGGAT GAAGGTCTAC GTTTTGCTAT CCGTGAAGGT
GGCCGTACTG TAGGTGCTGG TGTTGTTTCT AAAATCATCG AGTAA
 
Protein sequence
MSKAKFERKK PHLNVGTIGH VDHGKTTLTA AISAVLTKAH GGEVKDFASI DNAPEERERG 
ITINTSHIEY DTDTRHYAHV DCPGHADYVK NMITGAAQMD AGILVVAATD GPMPQTREHI
LLSRQVGVPH LIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GDPVWEAKVM ELADALDTYI PLPERDIDKP FILPIEDVFS IAGRGTVVTG RVERGIIKVG
QEVEIIGLRP TVKTTCTGVE MFRKLLDEGR AGENVGILLR GTKRDDVERG QVLAKPGSIK
PHTKFEGEVY ILSKDEGGRH TPFFKGYRPQ FFFRTTDITG AVELPEGVEM VMPGDNLKFV
VDLIGPVAMD EGLRFAIREG GRTVGAGVVS KIIE