| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3435 |
|---|
| Symbol | |
|---|
| ID | 4625589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4246721 |
|---|
| End bp | 4248409 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639798552 |
|---|
| Product | sulfite reductase subunit beta |
|---|
| Protein accession | YP_944718 |
|---|
| Protein GI | 119947038 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00387286 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AATTACACGA TAACGAACGT ATTAAAATTG AAAGTAACTT TCTTCGCGGT
AAATTAGTGG AAGGACTGAA TGATAATACT ACCGGTGCCT TTATACCTGA TGATGTTCAG
TTGGTTAAGT TTCATGGTTT ATATCAACAG GATCATCGCG ACTATCGCGC TGAGCGTAAA
AAACAGAAAT TAGAGCCTTT ATACTCTTTT CTGTTGCGCG CCCGTTTACC CGGTGGGGTT
GTTACTCCAC AGCAGTTATT AGAGATTGAC CGGATTGCCA GTGAATTAAC CGATGCCGGC
AGTATCCGCT TGACCACCCG TCAAACGTTC CAGTATCACG GCATCTATAA ACGCAATCTA
AAGTCAGTTT TTCAGGAACT TAAGTTCAAA GCGAACATTG ATTCTATCTT TACGGCGGGT
GATGTTAACC GTAATGTTAT TTGTACCTCT AACCCAATGC AGTCTGAACT GCATGCAGAG
GTATATGACT GGTCGACGAA AATAAGTGAA ATGTTATTAC CCCACAGTAA TGCCTTTGCT
GAAATTTGGT TAGACGGTGA AAAAGTGCAT GAAACCGAAC AAGAACCAAT TTATGGCGAA
ACCATGTTAC CGCGTAAATT TAAAACAACC GTTGTTTTGC CTCCCTTTAA CGATGTGGAT
GTGCACGCCA ATGATCTTAA CTTTGTGGCG ATCGTTGAAA ACGAAAAAAT AGTGGGTTTT
AACGTATTAG TGGGTGGTGG TTTAGGAATA ACCCACGGTG ATAAAACTAC TTTCCCGCGT
AAAGCAGATG ATTTTGGGTT TATTGCGGCA GAAGATATTT TAGAAATTGC CAAGGCAGTG
GTCACCACCC AACGTGATTT AGGTGGACGT ACTAGCCGTT CTCACGCACG TACAAAATAC
ACTTTAGAAA CTCATGGTGT AGAAAAATTT AAGGGTGAAG TGGAATCACG CTCTGGCATT
AAATTTTTGC CATCACGCCC CTATGAATTT ACCGAACGAG GCGATCGCAT CGGTTGGATA
AAAGGGACAG ATAAGAAATG GCATTTAACA GTATTTATTG AAAATGGCCG TATTCTGGAT
TACCCGGGTA AACCGCTTAA ATCCGGTTTA GTTGAAATTG CAAAAGTTCA TCAGGGTGAT
TTCCGCATGA CAGCGAATCA AAACCTGATC ATTGCTAGTG TACCGGAATC TGAAAAAGAA
AAAATTGAAG CATTGGCGCG TAAATGCGGT CTGATCAATG ATGCTCACTC TAAGCAGCGT
TTTAATTCTA TGGCCTGTGT AGCATTACCG ACCTGCCCGC TGGCGATGGC GGAAGCTGAG
CGCTACCTGC CGGGGTTAGT CACGGATGTG GAGGCATTGC TCACTAAGCA TGGTATTGGC
GACGACCATA TTATTTTAAG GGTGACGGGT TGCCCGAATG GTTGTGCTCG TCCTCTGCTT
GCTGAAGTCG GCTTAATAGG TAAAGCGCCG GGCCGTTATA ACCTTTATCT TGGCGGTAAT
ACCAACGGTA CCCGCTTGCC TAAGATGTAC AAAGAAAATA TTGATGAAGC AGCCATTATA
ATGACCATGG ATGAGTTAAT TGGTCGTTGG GCAAATGAGC GTGAAAGCGG TGAATGTTTT
GGTGATTTTG TTATCCGCGC TGCTATCATA GCTGAAGTTA TTATCGCTTC TAAGGATTTT
CATGACTAA
|
|---|
| Protein sequence | MSKKLHDNER IKIESNFLRG KLVEGLNDNT TGAFIPDDVQ LVKFHGLYQQ DHRDYRAERK
KQKLEPLYSF LLRARLPGGV VTPQQLLEID RIASELTDAG SIRLTTRQTF QYHGIYKRNL
KSVFQELKFK ANIDSIFTAG DVNRNVICTS NPMQSELHAE VYDWSTKISE MLLPHSNAFA
EIWLDGEKVH ETEQEPIYGE TMLPRKFKTT VVLPPFNDVD VHANDLNFVA IVENEKIVGF
NVLVGGGLGI THGDKTTFPR KADDFGFIAA EDILEIAKAV VTTQRDLGGR TSRSHARTKY
TLETHGVEKF KGEVESRSGI KFLPSRPYEF TERGDRIGWI KGTDKKWHLT VFIENGRILD
YPGKPLKSGL VEIAKVHQGD FRMTANQNLI IASVPESEKE KIEALARKCG LINDAHSKQR
FNSMACVALP TCPLAMAEAE RYLPGLVTDV EALLTKHGIG DDHIILRVTG CPNGCARPLL
AEVGLIGKAP GRYNLYLGGN TNGTRLPKMY KENIDEAAII MTMDELIGRW ANERESGECF
GDFVIRAAII AEVIIASKDF HD
|
|---|
| |