| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3390 |
|---|
| Symbol | |
|---|
| ID | 4625560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4189161 |
|---|
| End bp | 4190528 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639798506 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_944675 |
|---|
| Protein GI | 119946995 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTG ATGCACTAAA CCCTCTAGAA AGACGCACCG CCATCTCACT TTCCGTGGTG
TTTGCGTTAC GTATGTTAGG CCTGTTTATG ATCATGCCGG TCTTTGCCAT TTACGGGAAG
GAACTGATTG GTTATTCCCC GATCTGGGTA GGTTTTGCAA TTGGTGCCTA TGGTTTAACA
CAGGCATTAT TACAAATTCC CGCGGGCATG TTGTCTGACA AATTTGGCCG ACGTCCGATT
ATTTTTATCG GTTTACTGCT TTTTGCTATC GGCAGCTTAA TCGCTGGCTA TTCAGAAACG
GTTTATGGTG TAACAGCCGG ACGCGCTATT CAAGGTGCAG GTGCAATTGC CAGTGCGGTG
TTAGCCTTGG CAGCCGATGT CACAAGAGAA GAACAACGTC CCAAGGCAAT GGCCATGATT
GGGGTCAGTA TTGGCCTTGC CTTTGCATTG GCAATGGTTG CAGGTCCTGT TTTAGCACCC
ATAATTGGCT TACAGGGTTT ATTCTTTATT ACTGCAGCCG GTGCCCTGAC CGGTATTGCT
ATCGTCTATT TTGTCGTGCC GCACGTGGTT AGTAAAGCCC CCAGAGGCGA AACCGTTGCC
ATTCCTGCAT TGCTTGCAAA ATTAGTCAAA GATCCGCAAC TGCTACGTTT AGATGCTGGC
ATTTTCATTT TACACATGGC ACTCACGGCT ATGTTTGTCG TATTACCCCT GCAACTGCTG
AATATGCAAT TACCTGCAGC ACAACATTGG CACTTATACC TGCCGGCGTT ACTAGTTTCA
TTTATATTAA TAGTGCCTAT GCTTATCATG GCTGCCCGCA AGCAAATGAA CAAACAGTTT
TATCTGTTTG CCATTTTGTT AATGGCTGCA AGTTTAATTG CAATGTCACT TAACTCTCAA
TCACTTATAT GGATGTTTGT GTCCATATTA TTTTATTTCA CTGCTTTTAA TTTTTTAGAA
GCATCATTAC CGGCATTTAT CTCAATGGTC TCTCCTGCAG GCTCCAAGGG TAGTGCAATG
GGGATCTATA GCACTTGTCA GTTTTTAGGT GCTTTTTTTG GTGGGATTTT AGGGGGATTT
TCCTATAAAC TACTCGGTAG TAGTGGCTTA TTTTTATTTT TAGCCGGGTT AATGGCAATT
TGGTTTTTTA TCTCATTAGG TATGAATAAT CCAAGTAAAG TCCGCACCCA TACTATTACA
GCATTAATCA AGGATGAAAC TCATGCACAG TTAATGACTG AACAGCTAAT TATGCTGGAG
GGGGTCTTAG AAGTCGTCAT CATCGTTGAA GAACAAACAG TTTATATTAA AGTAAATAAC
CAAGTCTTTG CATTGAACAA AGCGCAAGAA ATTTTAGCAA ATACTTAA
|
|---|
| Protein sequence | MQSDALNPLE RRTAISLSVV FALRMLGLFM IMPVFAIYGK ELIGYSPIWV GFAIGAYGLT
QALLQIPAGM LSDKFGRRPI IFIGLLLFAI GSLIAGYSET VYGVTAGRAI QGAGAIASAV
LALAADVTRE EQRPKAMAMI GVSIGLAFAL AMVAGPVLAP IIGLQGLFFI TAAGALTGIA
IVYFVVPHVV SKAPRGETVA IPALLAKLVK DPQLLRLDAG IFILHMALTA MFVVLPLQLL
NMQLPAAQHW HLYLPALLVS FILIVPMLIM AARKQMNKQF YLFAILLMAA SLIAMSLNSQ
SLIWMFVSIL FYFTAFNFLE ASLPAFISMV SPAGSKGSAM GIYSTCQFLG AFFGGILGGF
SYKLLGSSGL FLFLAGLMAI WFFISLGMNN PSKVRTHTIT ALIKDETHAQ LMTEQLIMLE
GVLEVVIIVE EQTVYIKVNN QVFALNKAQE ILANT
|
|---|
| |