Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3376 |
Symbol | |
ID | 4625687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4168927 |
End bp | 4170741 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639798488 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_944661 |
Protein GI | 119946981 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.709986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAGC AAGTAAATAT GTCTAAGCCT CTCGGCATCA CTGAAGTTGT CCTACGCGAT GCGCATCAAT CATTATTTGC AACACGGATG CGCACTGAGG ATATGTTACC TATTGCGGAG AAGTTGGATA AAATTGGCTT CTGGTCATTA GAGACATGGG GTGGGGCTAC ATTTGATTCC TGTATCCGCT TTTTAGGAGA AGATCCATGG GAACGCCTGC GTGCTTTAAA AGCAGCCATG CCTAATACGC CTCAGCAAAT GTTATTACGC GGTCAAAATT TATTAGGTTA CCGCCATTAT GCCGATGATG TTGTTGAAAA ATTTGTAGAG CGTGCCCATA CCAATGGTGT GGATGTCTTC CGTATATTTG ATGCAATGAA TGATGTGCGC AATTTTGAAA CCGCGGTTAA ATCGGCGGTT AAAATTGGTG CGCACGCCCA GGGTGCTATT TCTTATACCA CTAGCCCTGT GCACACTGTT GATAACTGGG TCGATATGGC AAAACGCCTT GAGGATATGG GATGTCATTC TTTATGTATT AAAGATATGG CGGGTTTATT AAAGCCCTAT GTTGCAGAAG AGTTGATTAC AAAAATCAAG GCAAGTACCA ATATTCCGTT AGCGTTACAT TGTCATGCAA CGACTGGCCT TAGCATCGCA ACGCACCAAA AAGCGATTGA TTCCGGTATT GATATTATTG ATTCTGCCAT CTCTTCTATG TCGATGACCT ATGGACATAC TCCAACTGAA ACACTTGTTT CAATTGTTGA AGGTGAAGCG CGAGATACGG GTCTAGAACT GCCTAAACTT GCAGAGATAT CCGCTTACTT TCGTGATGTC CGTAAAAAAT ATGTGAAATT TGAAGGTGAA TTAAAAGGTG TTGATCCGCG CATCCTGATT GCCCAAGTGC CCGGCGGCAT GTTAACTAAC ATGGAAAGCC AGCTTAAAGA GCAGGGCGCT GCAGACAAGA TGGATCAAGT GTTGGCCGAA ATCACCGCAG TGCGTAAAGA TCTTGGTTAT ATTCCGCTGG TTACCCCGAC CTCTCAAATT GTCGGTACGC AAGCTGTTAT TAATGTATTG ATGGGCGAGC GTTATAAAAA TATAACCAAA GAAACTGCCG GCGTGTTAAA AGGAGAGTAT GGCGCAACAC CAGCTCCTGT TAATGCTGAG CTGCAGGCGA AAGTATTAGA GGGCGGAACT GCAATTACTT GTCGTCCTGC TGATAACATT GCGCCTGAAA TGAAAAATAT CCAGGCCGAA TTTAAGAAAC TTGCCACTGA AAAAGGCATT AAAATTGCGC AACATGAGAC TGATGATGCA TTGATTTATG CTTTATTTCC TGAAATTGGT CTTAAATTTT TAGAAAACCG TAATAACCCC GATGCATTTG AGCCCGTCCC CAGCGCTGAC GATGTTAAAC CAGCGGCTAA AACGGCAACT AAGGCGCAAC AAGGTGGTGC AGAAACTTAT TCAGTGGCCG TTGATGGGCA ATTATATACT GTCCAAGTTG GCCCTGAAGG CAGTGTGGAA GGCATAAAAG CAGGACCGCC GAGCGCAACT TTGTCAGCCT CAGCCTCAGC TTCAACCGAA GCGACAGTGA TGAGCGAGGA ATTACCAGCA CCATTGGCGG GTAATATCTT TAAAGTGTTG GTTAGTGAAG GTGAGAAGGT TGAGGAAGGC GATGTGCTTT TGATAATGGA AGCGATGAAG ATGGAAACTG AGATTCGAGC ACCAAAATCG GGGGTTATCC AAGGCGTTTT TGTCAAAGAA GGTTCTTCTG TTGCCGTGGG TGAAACCCTG TTTAAAATAG CTTAA
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Protein sequence | MKEQVNMSKP LGITEVVLRD AHQSLFATRM RTEDMLPIAE KLDKIGFWSL ETWGGATFDS CIRFLGEDPW ERLRALKAAM PNTPQQMLLR GQNLLGYRHY ADDVVEKFVE RAHTNGVDVF RIFDAMNDVR NFETAVKSAV KIGAHAQGAI SYTTSPVHTV DNWVDMAKRL EDMGCHSLCI KDMAGLLKPY VAEELITKIK ASTNIPLALH CHATTGLSIA THQKAIDSGI DIIDSAISSM SMTYGHTPTE TLVSIVEGEA RDTGLELPKL AEISAYFRDV RKKYVKFEGE LKGVDPRILI AQVPGGMLTN MESQLKEQGA ADKMDQVLAE ITAVRKDLGY IPLVTPTSQI VGTQAVINVL MGERYKNITK ETAGVLKGEY GATPAPVNAE LQAKVLEGGT AITCRPADNI APEMKNIQAE FKKLATEKGI KIAQHETDDA LIYALFPEIG LKFLENRNNP DAFEPVPSAD DVKPAAKTAT KAQQGGAETY SVAVDGQLYT VQVGPEGSVE GIKAGPPSAT LSASASASTE ATVMSEELPA PLAGNIFKVL VSEGEKVEEG DVLLIMEAMK METEIRAPKS GVIQGVFVKE GSSVAVGETL FKIA
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