Gene Ping_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3358 
Symbol 
ID4625703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4150007 
End bp4150843 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content41% 
IMG OID639798470 
Productcyclic AMP phosphodiesterase 
Protein accessionYP_944643 
Protein GI119946963 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0573033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA TGAGCACACA AGCCACAAAA TTAAGATCAG ACCAGCAGGG TTGTTTACAA 
CTTCTGCAAA TCACCGATAC CCATCTTTTT TCCGATCGGA ATAAAGACTT GCTTGGTATT
AAACCAGCTG AAAGTTATGA AGCTGTGATT AAACACGCCT CTCGTTACTC ATCCAAGTGT
CAGGCAGTTT TATCAACGGG AGATCTATCT CAAGATCATA CCCAGCAATC TTACCTTGAT
TTTACCAAGC AGATAAAAAC CTTGAATTTA CCCTGTTACT GGTTGCCCGG CAATCATGAT
ACGCAATCGG TGATGTTGCC CAGTCTTTTG CAGGAGGGCC TCGCGCAGAG CAAACAAATT
GTTAGCGATT TTTGGCAAAT TATTTTACTG GATTCACAAG TTGAAGGTGC GCCCCATGGG
TTTTTAACGG AGCAGCAACT GAATTTTTTA CAGCAAGCTT TGACTGAATA TCCCGATAAA
CATACTCTGA TTTGTGTGCA CCATCATGTT TTACCGGTTA AATCAGCCTG GTTAGATCAG
CATATTCTAA AAAATAATCA GCAATTTTTA GAACTCATCA AGTTGCATAA AAATGTACGT
GTGGTGCTGT CCGGGCATGT TCATCAGGCG GGTGATATCG AATTTAATCA GGTGCGATTT
TTAACCAGCC CATCTACCTG CTTACAGTTT AAGCCCAATT CTGAGGATTT TGATGTTGAT
GATAGTGCGC CCGGTTACCG CTATTTAGCG TTGCATAAAA ATGGTACTAT TACGACCAAA
GTTGAGCGCG TAGCGCATGG AGAATTTTCC CCCAATAAAA ACGCAACAGG TTATTAA
 
Protein sequence
MKVMSTQATK LRSDQQGCLQ LLQITDTHLF SDRNKDLLGI KPAESYEAVI KHASRYSSKC 
QAVLSTGDLS QDHTQQSYLD FTKQIKTLNL PCYWLPGNHD TQSVMLPSLL QEGLAQSKQI
VSDFWQIILL DSQVEGAPHG FLTEQQLNFL QQALTEYPDK HTLICVHHHV LPVKSAWLDQ
HILKNNQQFL ELIKLHKNVR VVLSGHVHQA GDIEFNQVRF LTSPSTCLQF KPNSEDFDVD
DSAPGYRYLA LHKNGTITTK VERVAHGEFS PNKNATGY