| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3338 |
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| Symbol | |
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| ID | 4625717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4125614 |
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| End bp | 4127149 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798451 |
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| Product | threonine dehydratase, biosynthetic |
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| Protein accession | YP_944624 |
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| Protein GI | 119946944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAT TATCCGCAGC ACAATACTTA AAAAAAATCT TACTTGCTCC TGTTTATGAA
GCAGCCATAG AAACACCCTT ACAACCGTTA ACTAAGTTAT CAGAGCGCTT TAATAATCAA
ATTTTATTAA AGCGTGAAGA TCAGCAACCC GTGCATTCCT TTAAATTACG CGGTGCCTAT
AATAGATTAT CGAATTTAAC TGACGAGCAA AAAAGCTGCG GTGTGATTGC TGCCTCGGCA
GGTAACCATG CCCAAGGTGT TGCGCTCTCA GCACAACGCA TGGGGATGAA AGCAACGATA
GTTATGCCCT GCACCACACC CGAGATAAAA GTCAGTGCAG TGCGGGCATT CGGTGCCGAG
GTGGTGTTAT TTGGTGATGC TTTTGATGCT GCCAGCAAGC ACTCTAAAGA ACTGGCTGAA
TTACATAATT ACACCTCAAT TCCTCCTTTT GATGATCCCG ATGTTATTGC CGGACAAGGT
ACTGTTGGCA AAGAGTTATT ACAGCAAAAT GCCCACCTCG ATAAAATTTT TGTCCCCGTC
GGTGGCGGTG GATTGATTGC TGGTATTGCC GTTTATGTTA AACAGCTTTT ACCCAATATT
AAGGTGATTG GCGTTGAGCC TGACAATGCA GCTTGTTTAA AAGCCGCGTT GGAGCATGGT
AGCCCGATAA CCTTAGATAA AGTTGGATTA TTTGCCGACG GTGTTGCCGT TAAGACCATT
GGCAGTGAAA CATTTCGTTT GTGTCAGCAA TATGTTGATG AAGTGATCAC CGTTAGCAGT
GATGAAATCT GCACCGCAGT AAAAGATATC TTTGAAGAGA CGCGCGCAAT TTCGGAGCCT
TCCGGGGCAT TATCATTGGC AGGTTTAAAA AAATATTGTC AAGTACACGA AATTAAAAAT
CAAAACCTTG CCGCCATTTT AAGTGGAGCC AACCTCAACT TCCATTCCCT GCGTTATATC
TCCGAGCGTT GCGAATTAGG TGAGCAGAAA GAGAGCGTGC TGGCTGTCAC TATCCCTGAA
AAACAGGGCG CTTTTTTAGC CTTTTGTAAT CAGCTCGACG GGCGTGCTAT TACCGAGTTT
AATTATCGTT TAAATTCGCG TAAAAACGCA AATATTTTTG TTGGCGTACG CACCCCGCAA
GGTGTTGATG AACTTTTAGC GTTGACCGAA AAACTGCACA AATCAGGTTA TTCTGTTGCC
GATTTAAGCA ATGATGAAAT GGCCAAACTG CATGTCCGTT ATATGGTTGG TGGCGCACCC
GTCAGTGCTA TAAAAGAGCG TTTATACAGT TTTGAATTTC CTGAACAGCC TAATGCGCTG
ATTAAGTTTT TAAATATGCT TGGCACTCAC GCTAATATAA CGCTATTTCA TTACCGCAAT
CACGGCGCGG CTTATGGACA GGTTCTTGCC GGTTTTGAAC TCGACGAAGG GGTTGATGCA
TTCAGTGAAC ATTTAGATGC ACTGGGTTAC AACTATAAAG ATGAAACAGA GAACCAGGCT
TATCGTTTCT TTTTATCCCA TGCGAATGAT CACTAA
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| Protein sequence | MTELSAAQYL KKILLAPVYE AAIETPLQPL TKLSERFNNQ ILLKREDQQP VHSFKLRGAY
NRLSNLTDEQ KSCGVIAASA GNHAQGVALS AQRMGMKATI VMPCTTPEIK VSAVRAFGAE
VVLFGDAFDA ASKHSKELAE LHNYTSIPPF DDPDVIAGQG TVGKELLQQN AHLDKIFVPV
GGGGLIAGIA VYVKQLLPNI KVIGVEPDNA ACLKAALEHG SPITLDKVGL FADGVAVKTI
GSETFRLCQQ YVDEVITVSS DEICTAVKDI FEETRAISEP SGALSLAGLK KYCQVHEIKN
QNLAAILSGA NLNFHSLRYI SERCELGEQK ESVLAVTIPE KQGAFLAFCN QLDGRAITEF
NYRLNSRKNA NIFVGVRTPQ GVDELLALTE KLHKSGYSVA DLSNDEMAKL HVRYMVGGAP
VSAIKERLYS FEFPEQPNAL IKFLNMLGTH ANITLFHYRN HGAAYGQVLA GFELDEGVDA
FSEHLDALGY NYKDETENQA YRFFLSHAND H
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