Gene Ping_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3308 
SymbolpflA 
ID4625758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4080285 
End bp4081025 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID639798418 
Productpyruvate formate lyase-activating enzyme 1 
Protein accessionYP_944594 
Protein GI119946914 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.760643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA CAGGACGAGT TCATTCCGTT GAAAGTTGTG GTACCGTTGA TGGTCCTGGG 
ATCCGCTTTA TTATTTTTTT ACAGGGCTGT TTAATGCGCT GTCAATATTG TCATAACCGC
GACACTTGGG ATACCGAGGC CGGTAAAGAG ATGAGCGTTG AAGAATTAAT GGCCGAACTG
CTGCAATATC GCCATTACAT GGAAGCATCG GGGGGCGGCA TTACCGTTTC CGGGGGCGAA
GCAATGCTCC AGCCTGAATT TATTAAAGCG ATCTTTGAAG CCTGCCATCT GGAGGGAATT
CATACCTGTT TAGATACTAA TGGTTTTGTG CGCCGAATCG ATGACACGGT TAAAAGCGTG
CTCGATCACA CTGATCTAGT ATTATTAGAT ATCAAACAGA TGGACAATGA TAAACATATC
GACTTAACCC ACGTCAGTAA TAAATACACG CTGGAATTTG CTCACTATTT AGCAGAGCGT
CACCAAGCGG TCTATTTACG TTATGTGGTT TTACCCGGTT ATACCGATGC TATCGATGAT
ATACATGCCT TAGGTAAATT TATAAAGCCT ATGAAAAACA TCGAAAAAAT AGAGCTATTA
CCCTACCATG AATTAGGTAA GCATAAATGG ACCGCAATGG GGGAAATCTA CCCGCTAGAT
GGCGTTAGCC CACCAACTCG TGAGAGTATG GACAAAATAA AAGAGATTCT TTTACAATAC
CATGACTGCG TTATCTACTG A
 
Protein sequence
MSVTGRVHSV ESCGTVDGPG IRFIIFLQGC LMRCQYCHNR DTWDTEAGKE MSVEELMAEL 
LQYRHYMEAS GGGITVSGGE AMLQPEFIKA IFEACHLEGI HTCLDTNGFV RRIDDTVKSV
LDHTDLVLLD IKQMDNDKHI DLTHVSNKYT LEFAHYLAER HQAVYLRYVV LPGYTDAIDD
IHALGKFIKP MKNIEKIELL PYHELGKHKW TAMGEIYPLD GVSPPTRESM DKIKEILLQY
HDCVIY