| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3293 |
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| Symbol | |
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| ID | 4625779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4065027 |
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| End bp | 4066469 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639798403 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_944579 |
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| Protein GI | 119946899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.313237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGC GTATTCTGTG TTTTGCTTTA TTTCTACTGC CGGTAAATTT ACTGGCTGAT
CAATGGTCAG CACTGCATGC TTTATTACCT AAAGGGACAC AGCTTTCTTA TTTGGTATTG
GATCCTGCCA ATAATCAATT GCTTGCTGAG TCCAATGCCG AGATCCTGCG TACTCCGGCA
AGCTTACAGA AGTTATTAAC AGCGACGGCT GCCAAGTTAT ATCTAGGTGA AAATTTTCGC
TATCAAACAA CCCTTGAGGG CAACAAAAGT CACATTAAAA ATAATCATTA TCAGGGTGAT
ATTCGCTTAC GTTTTGTTGG GGATCCCACC CTGTCGCGTG CAGATATCAA AGAGATGCTA
ACATCTTTTA AAGCATTGGG TGTCAAGCAG ATAAGGGGTG ATCTTTTAAT TAACGCGGCT
CATTTTAGCG GCTATCAATG GAGTGATGGT CAGGCCTGGA ATGATTTGGG TGTCTGTTAT
ACCTCTCCGT CAAATGCCAT TATTGTTAAC AGAAATTGCG TATTAGGTAA CCTCAGCGTA
GTGAGTGCAG ATGCCAAAAA AGCGCGTTTA TTTATTCCAA GTTATGAACC CGTTGAGATA
AGCAGTAACG TCGATGTGGT CACATCTGCG CAGCGAGATG AGCAATTTTG CGCCTTAAAA
ATGACCCGTA ATAGTGATAA CCGTTACCAT TTATGGGGTT GTATGGTGCC GAGGAATCGT
CCTTTTGGTT TGGCTTTTTC GGTCAACGAT CCCTTTGCAT ATGCGAGTCA AATTATTGAA
TCAGAACTAA AAAATGTCGG TATTAAGTTG ACTGGTAAGG TGAAAATTGA GCAGATAAAA
ACAGCTAAGA AAGTCTCGCA AGTATTAGTT AAGTATCAAT CCCCTGAGCT AGGGAAATTA
TTGGAAATTA TGCTCAAAGA CTCAGATAAT TTAATTGCGG ATAGTCTTTT CAAAACACTG
GGTGCTGCCT ATTTTCAACA GGACGGCAAT TTTCTCAATG GTGCTAAGGC GCTTAAATTA
ATTCTGCAGG AGAACGGTGT TGATTTAGAA AATGCTTATC TGGCCGATGG TTCCGGGTTA
TCTCGTCATA ATTTAATGAG TGCTAAATTG TTTATGACTG TCCTTAAATA TGTTTACCAA
AATGATGCTA AATTAAACTT GTTAGACAGT TTTTCAATTG CTGGAGTAGA CGGCACACTG
CATTACCATA AAGGGGTCGC AGGACCTTTG TTAAAAGGTA ATATTGTTGC AAAAACGGGG
TCGATGAAAG GTGTGGCAAA CTTATTGGGT ATTGTTAAAA CGGCGCGTGG GGAGCGTCTT
TTTGCTTTAA TTATAAACGG CTATAATTGG CCTGAGACCG ATTTAACTAA AGCCACAAAA
TCACCTGTTG TTATTTTTGA ACATGCTTTT TTTGAAACAA TAATAAAGTC TTCCCGCAAA
TAA
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| Protein sequence | MFKRILCFAL FLLPVNLLAD QWSALHALLP KGTQLSYLVL DPANNQLLAE SNAEILRTPA
SLQKLLTATA AKLYLGENFR YQTTLEGNKS HIKNNHYQGD IRLRFVGDPT LSRADIKEML
TSFKALGVKQ IRGDLLINAA HFSGYQWSDG QAWNDLGVCY TSPSNAIIVN RNCVLGNLSV
VSADAKKARL FIPSYEPVEI SSNVDVVTSA QRDEQFCALK MTRNSDNRYH LWGCMVPRNR
PFGLAFSVND PFAYASQIIE SELKNVGIKL TGKVKIEQIK TAKKVSQVLV KYQSPELGKL
LEIMLKDSDN LIADSLFKTL GAAYFQQDGN FLNGAKALKL ILQENGVDLE NAYLADGSGL
SRHNLMSAKL FMTVLKYVYQ NDAKLNLLDS FSIAGVDGTL HYHKGVAGPL LKGNIVAKTG
SMKGVANLLG IVKTARGERL FALIINGYNW PETDLTKATK SPVVIFEHAF FETIIKSSRK
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