| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3289 |
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| Symbol | |
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| ID | 4625775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4059526 |
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| End bp | 4061241 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639798399 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_944575 |
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| Protein GI | 119946895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.605586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.115302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACGA CCAACTACTT ACTTTCAACT CAAAAAGAAG CACCCAGCGA TGCGGTAATT
GTAAGCCATC AGCTTATGTT ACGTGCAGGC ATGATCCGTA AATTAGCATC GGGTTTATAT
ACCTGGTTAC CGACGGGGTT ACGGGTTTTA CGTAAAGTTG AAACTATCGT GCGTGAAGAG
ATGGAACGAG CCGGAGGTGT TGAAGTCTTA ATGCCAATTG TGCAACCTGC AGATCTTTGG
CTAGAAACAG GTCGCTGGGA TCAATACGGC GGTGAGCTGT TACGTATTAA AGATCGCCAT
ACACGTGATT TTGTATTGGG CCCAACACAC GAGGAAGTGA TCACTGAGCT TGTGCGCAAA
GAAGTAAACA GTTACAAACA GCTACCACTC AATCTTTTCC AAATTCAGAC AAAATTCCGC
GATGAAACTC GTCCGCGTTT TGGTGTTATG CGTGCGCGCG AATTTACCAT GAAAGATGCG
TACTCTTTTC ATATGGATCA AGCTTGTCTG GAAAAAACAT ATCAGAAAAT GTTTGACGCT
TATTGTCGTA TCTTTGACCG CTTAGGTCTT GAATACCGCC CTGTTATTGC CGATACTGGA
AGTATTGGCG GCAGTGCATC TCATGAATTC CACGTACTTG CGCAAAGCGG TGAAGATGCC
ATTGTTTTCT CAACTGAAAG TGATTACGCG GCAAATATTG AAAAAGCAGA AGCATTGGCA
CCGAGCACTG TTCTTGCAGC ACCCACTGCT GAAATGGGAC TGCTTGATAC CCCAAATGCA
AAAACTATCG CTGAACTCGT TTCGAAACAT GGCATTGCTA TTGAAAAGAC GGTCAAAACT
TTATTTGTTA AAGCGTCTGA TCAAATTGAA ACGGAGCTGA TCGCGCTTAT CATCCGTGGT
GATCACGAAC TTAATGAGAT TAAAGCTGAA AATTTAGCCT CTGTCGCTGC TCCACTTGAA
TTCGCCAGCG AAAGTGAAAT CAGAGCATTG GTTAATGCAG GCCCGGGCTC ACTGGGTCCA
GTTTCTCTAC CAGTGCCCTT TATTGTTGAC CGTTCAGTGG CTGTTATGAG CGACTTTAGT
GCCGGTGCAA ACATTGATAA TAAACATTAC TGCAACATTA ACTGGGGCCG CGACGTTGAA
CTTGCTCAAG TTGAAGATCT GCGTAATGTC GTTGAAGGTG ATCCAAGCCC CTGCGGTAGT
GGAACACTTT CAATGGCACG GGGTATCGAA GTGGGACATA TTTTCCAACT GGGTGATACT
TATACTAAAG CGATGAATGC CGGCGTACTT AACCAGCAAG GTAAAAACCA GATATTAACC
ATGGGTTGTT ACGGCATTGG TATCTCACGT ATTGTTGCTG CTGCTATTGA GCAAAACAAT
GATAAAAATG GCATTATTTG GAACAATACA CTGGCGCCTT TTTCGGTAGT TATTGTCCCA
ATGAATATGC ATAAATCACA TCGTGTCGCA GAACTTGCTG AAAAATACTA TGCAGAATTA
CAAGCAGCAG GTATCGAGGT GTTATTTGAC GATCGTAAAG AACGCCCTGG TATTATGTTT
GCGGATGCAG AGCTTATGGG TATTCCACAT ACCCTGGTGA TTGGAGATCG TAGTTTGGAT
AATGGCGTGA TTGAATATAA AGATCGCCTA TCGGGTGTAA AACAGGAAGT TGCTATTGAT
GAGGTTATTA ACTTTATCAA AGCCCAACTC GCTTAA
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| Protein sequence | MRTTNYLLST QKEAPSDAVI VSHQLMLRAG MIRKLASGLY TWLPTGLRVL RKVETIVREE
MERAGGVEVL MPIVQPADLW LETGRWDQYG GELLRIKDRH TRDFVLGPTH EEVITELVRK
EVNSYKQLPL NLFQIQTKFR DETRPRFGVM RAREFTMKDA YSFHMDQACL EKTYQKMFDA
YCRIFDRLGL EYRPVIADTG SIGGSASHEF HVLAQSGEDA IVFSTESDYA ANIEKAEALA
PSTVLAAPTA EMGLLDTPNA KTIAELVSKH GIAIEKTVKT LFVKASDQIE TELIALIIRG
DHELNEIKAE NLASVAAPLE FASESEIRAL VNAGPGSLGP VSLPVPFIVD RSVAVMSDFS
AGANIDNKHY CNINWGRDVE LAQVEDLRNV VEGDPSPCGS GTLSMARGIE VGHIFQLGDT
YTKAMNAGVL NQQGKNQILT MGCYGIGISR IVAAAIEQNN DKNGIIWNNT LAPFSVVIVP
MNMHKSHRVA ELAEKYYAEL QAAGIEVLFD DRKERPGIMF ADAELMGIPH TLVIGDRSLD
NGVIEYKDRL SGVKQEVAID EVINFIKAQL A
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