Gene Ping_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3271 
Symbol 
ID4626304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4035358 
End bp4038192 
Gene Length2835 bp 
Protein Length944 aa 
Translation table11 
GC content44% 
IMG OID639798378 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_944557 
Protein GI119946877 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATT ACAAAAGTAC ATTAAACCTA CCTAAAACAG GTTTCCCGAT GCGTGCAAAT 
CTTGCTAATC GTGAACCTAA TATGCTGAAA AATTGGTACA GCAACGACCT TTACGGAAAG
ATCCGTGCAG CTAAAAAAGG TAAAAAAACA TTTATTCTGC ATGATGGTCC TCCCTATGCA
AATGGTGATA TTCATATCGG TCACTCGGTT AATAAAATTC TTAAAGACAT TATTATTAAA
TCAAAAACAT TATCTGATTT TGATGCACCC TATATCCCCG GTTGGGATTG TCATGGTCTG
CCCATTGAGT TGAAAGTTGA GCAAAAAGTT GGCAAACCCG GTAAAAAAAT CAGTGCCGCT
GAATTCCGCA AAAAATGTCG TGAATATGCA GCGCGCCAAG TTGATGGCCA ACGTAAGGAT
TTTAAACGTC TGGGTGTGTT GGGGGAGTGG GATAAACCCT ATCTTACGAT GGATTTTGGC
ACCGAAGCGA ACATTGTTCG CGCGCTGGCG CAAGTGATTA AAAATGACCA CCTCCACAAA
GGCTCTAAAC CTGTGCATTG GTGTACAGAA TGCGGTAGTG CATTGGCTGA AGCCGAAGTT
GAATATGAAG ATAAACTATC ACCGGCCATT GATGTCGCTT TTAGCGCGGT CGATAACGAA
CAAGTTTTAA ACTGTTTTAG CGCTGTGACT GATAATCTGG GGGAAGGTAA TGTCTCTGCT
GTGATCTGGA CAACCACGCC TTGGACACTG CCGGCTAACC GCGCCATTGC ATTAGCACAA
AAAGTAGAAT ACTCCTTAGT ACAAGCAGGA GAGCGGCGTT TAATTATAGC GACGGATCTG
GTGGCCGATT GTCTGAAACG TTACGGCAAT GAAGATTTCA GCACCTTAGC TATCTGTAAA
GGGATTGATT TAGAGAAGCA ATTATTTAAC CATCCCTTCT TGGACTTGCA GGTACCTGCC
ATTCTTGCTG ATTACGTCAC CGTTGATGCG GGTACTGGTT GTGTACATAC CGCGCCAGGG
CATGGTCAGG ACGATTATGC TGTTGGTTTA CGTTACGATT TAGAGGTTGC TAACTACGTT
GCAGATAACG GTGTTTTCCG TGACGATACC GAATTTTTTG CAGGCTTACA TGTGTTTAAA
GCTAATGACC GGGTGCTTGA AGTATTAGCA GAAAGAAATG CATTACTGTG CTCTATCAAA
TTGAATCACA GTTACCCGCA TTGCTGGAGA CATAAAACGC CGATTATTTT TCGCGCTACG
CCACAGTGGT TTATCGCCAT GGATCAAAAA AGTTTACGCG CTGATGCGCT CGCTGAGATT
CAAGCTGTTA AATGGATCCC AAGTTGGGGT CAACAACGTA TCGAAAAAAT GGTTGAGAAC
CGTCCTGACT GGTGTATCTC TCGTCAACGT ACATGGGGTG TCCCTATTAC CCTGTTTGTA
CATAAAGAAA CCGATGAACT GCACCCAAAC AGTGTTGAAA TGATGGAGCT TATTGCGCGT
AAAATTGAAA TCGATGGCAT TCAAGCATGG TGGGATTTAG AGCCGGAAAC CCTGTTAGGT
TTTGAAGCTG AAGAATACCG CAAAGTAACA GATACCTTAG ATGTGTGGTT TGATTCCGGT
ACAACCCATG CTTCGGTTGT AGCAAAACGT GAAGAGTATA CGTTAGAATC GGGTGAGCAA
GCGGCAGCTG ATATGTATCT TGAAGGTTCA GATCAACATC GGGGCTGGTT CCAGTCATCG
TTAATGACCA GTATGGCAAT TAACAATAAA GCACCTTACA AAGAAGTATT GACCCACGGT
TTTGTGGTTG ACGGCAACGG CAAAAAAATG TCCAAGTCGT TAGGCAATGT GATGTCTCCA
CAAACCGTTA TGAATAATCT TGGCGCCGAT ATTCTGCGTT TATGGGTTGC TTCAACGGAT
TACACCGGTG AGATGACGGT TTCTGATGAA ATACTTAATC GCAGTGCAGA CAGTTACCGT
CGTATCCGTA ATACATCACG TTTCTTACTG GCTAACTTAA ACGGTTTTGA TCCAACCACT
GATTTAGTGC CTAATGAAGA AATGGTTGCG CTGGATCGCT GGATTGTAGC GCAAACATTA
ATATTACAAA ATGACGTTAT TGAAGCCTAC GAAAGTTATA GTCTGCATGC GGTTTATCAA
AAGTTGACCC ATTTCTGCTC TATCGAATTA GGTAGCTTCT ACCTGGATAT CATTAAAGAT
CGTCAGTACA CAGCTAAAGC GGACAGTAAC GCGCATCGCA GTTGTCAAAC CGCATTGTTC
CATATTGCAG AAGCGCTGGT ACGTTTGATG GCACCCATTC TAAGTTTTAC CGCCGATGAA
ATTTGGGCGC GTCTGCCGGG CGCACGTGAT GAATTTGTAT TCACCACGGT TTGGTATGAT
GGTTTATTTA GCCTGTCTGA TAATGAAGCC TTGAGCAGTG CTGCATGGTC GAAGTTAACG
TTAGTCCGTG CCGAGGTGAA TAAGGCCTTA GAAATCGCCC GTAAAGAGAA TGCTATTGGG
GGTGGTTTGG AAGCCGAAGT TATCCTTTAT GCGTCCGATG AAATAGCGAC TTTATTAACC
ACCTTAGAAG ATGAATTGCG TTTTGTTCTA ATCACATCGC AAGCGCAGGT TAAACCCTTA
GCAGATGCCC CGCAATTGGC TCTTAAAACT GAAGTGACTG GTTTATTGGT CTCTGTTGTT
AAGAGTGCGG CGCCTAAGTG TGAGCGTTGT TGGCATCACC GGGAAGAGGT TGGACAAAAT
AAACAGCATC CTGAATTATG TGGTCGCTGC GTGACCAATA TTGAAGGGCA GGGTGAAATC
CGTAAATTTG CGTAA
 
Protein sequence
MSDYKSTLNL PKTGFPMRAN LANREPNMLK NWYSNDLYGK IRAAKKGKKT FILHDGPPYA 
NGDIHIGHSV NKILKDIIIK SKTLSDFDAP YIPGWDCHGL PIELKVEQKV GKPGKKISAA
EFRKKCREYA ARQVDGQRKD FKRLGVLGEW DKPYLTMDFG TEANIVRALA QVIKNDHLHK
GSKPVHWCTE CGSALAEAEV EYEDKLSPAI DVAFSAVDNE QVLNCFSAVT DNLGEGNVSA
VIWTTTPWTL PANRAIALAQ KVEYSLVQAG ERRLIIATDL VADCLKRYGN EDFSTLAICK
GIDLEKQLFN HPFLDLQVPA ILADYVTVDA GTGCVHTAPG HGQDDYAVGL RYDLEVANYV
ADNGVFRDDT EFFAGLHVFK ANDRVLEVLA ERNALLCSIK LNHSYPHCWR HKTPIIFRAT
PQWFIAMDQK SLRADALAEI QAVKWIPSWG QQRIEKMVEN RPDWCISRQR TWGVPITLFV
HKETDELHPN SVEMMELIAR KIEIDGIQAW WDLEPETLLG FEAEEYRKVT DTLDVWFDSG
TTHASVVAKR EEYTLESGEQ AAADMYLEGS DQHRGWFQSS LMTSMAINNK APYKEVLTHG
FVVDGNGKKM SKSLGNVMSP QTVMNNLGAD ILRLWVASTD YTGEMTVSDE ILNRSADSYR
RIRNTSRFLL ANLNGFDPTT DLVPNEEMVA LDRWIVAQTL ILQNDVIEAY ESYSLHAVYQ
KLTHFCSIEL GSFYLDIIKD RQYTAKADSN AHRSCQTALF HIAEALVRLM APILSFTADE
IWARLPGARD EFVFTTVWYD GLFSLSDNEA LSSAAWSKLT LVRAEVNKAL EIARKENAIG
GGLEAEVILY ASDEIATLLT TLEDELRFVL ITSQAQVKPL ADAPQLALKT EVTGLLVSVV
KSAAPKCERC WHHREEVGQN KQHPELCGRC VTNIEGQGEI RKFA