Gene Ping_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3218 
Symbol 
ID4624651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3973164 
End bp3973439 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content40% 
IMG OID639798325 
ProductDNA-binding protein HU alpha subunit 
Protein accessionYP_944504 
Protein GI119946824 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.585838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CTCAACTTAT TACTGATATT GCAGAGAAAG CAGAACTAAC AAAAGTTCAA 
GCTAAAGCGG CTTTAGAACA GATGATGACT AGCGTAACAG ACAGTCTAAA AGATGGTGAG
CCAGTACAGT TAATTGGATT TGGTACTTTT AAAGTAAACC ACCGGGCAGC CCGTACAGGT
CGAAATCCAC AAACTGGGGC CGATATTCAA ATCAAAGCGG CTAATGTACC TGCTTTTGTT
GCCGGTAAAT CGCTTAAAGA AGCCGTTAAT AAATAA
 
Protein sequence
MNKTQLITDI AEKAELTKVQ AKAALEQMMT SVTDSLKDGE PVQLIGFGTF KVNHRAARTG 
RNPQTGADIQ IKAANVPAFV AGKSLKEAVN K