Gene Ping_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3212 
Symbol 
ID4624821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3967122 
End bp3968375 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content39% 
IMG OID639798319 
Productpeptidase M23B 
Protein accessionYP_944498 
Protein GI119946818 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.321571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.507005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA CCAACCTTAG CAAAAAAAAG CGCATTTCAG CAGTGTTGGT TAACTGCTTT 
CTTTTATGCT TTATCCTTTC AATCCAAAGC AGTTTTGCAG CTGATAAACT TGCGACAATT
GAGCTCCAAA TAAAAACCGC CAAAGGCGCG CAAAACAAGC AAACTAAACA ACAGAAGTTA
TTGGAAAAGT TGGTTGCCAA TGCTGAAAAA GAGACTGCCA TTGCAACGCT TAAAGTACAG
CAGACCAAGG AAACAATACA ACTTGAAAAC AGCCGCCTTA AACAATTAAT CGAACAAACA
GCCATACTTG AAGAAGATAA AATAAAACAA CAAAAACTGC TTGAACAGCA ATTAATCAGC
TCCTACATGA CAGGACAAAC TGATTTAATA AAACTAATTT TAAATCAAGA AGATATCAGT
AAAATAATTC GTGCAAAAAG TTATTACCAG TACCTTAATA AAGCACGTCT GGAAAGCATT
AACGCACTGT ATGAAACACA ACAACAATTA GAAAATAACA AGTCTGCGCA AGCCGATTCT
TTGCTGGCGT TAACCGGATT ATATGAGAGA CAGAAAGTAA GTGCAGAAGC GTTGCTCGAA
CAACGCGCGG AGCGAAGCAA AGCGTTAAAA GAGTTAAACC AAGATTTAAA TTATCAGTAT
GCACTGCTGG CACAACTTGG TGATCAGGCA CAAAATTTAA AAGAAAAACT CAGAAAACAA
AGTGAAGCGC GACAAAAACG TGAATTAGCA GCAAAAGCAA AAGCAAAAGC AAAAGCACTT
AAAAATAGAC AATCCAAATC AGAAGAGAAA ACTAATTCCA ACATCGCTAA AGGAAAAGAG
GAAACCTATT CCAATATTGC TAAACAATTA GGGCAATTGA ATTGGCCAAT TCAAGGAGAG
GTTTTATCCC GGTTTGGCAG TCAGCGTAGT GGACAGGTAA CGTGGAAGGG TATCACCATT
GAGGCGAATG AAGGTGAAAA AGTACAGGCT GTCGCAAGCG GGCGAGTTTT ATTTGCCGGC
TATTTTAAAG GTTATGGCAT GGTCCTCGCA TTAGATCACA GTGATGGTTA CATTAGCTTA
TATGGATACA ACCAAACCCT GTTACAGGAA ACAGGCGATC TTGTTCTACA GGGTGATACA
ATCGCCCTGG CCGGGCACAG TGGTGGACAA GATAATAACA GTCTATATTT TGAATTGAGC
CACAAAGGTA CAGCTAAAGA TCCCCTGCTC TGGCTTAAAA AGAAACACAA CTAG
 
Protein sequence
MTNTNLSKKK RISAVLVNCF LLCFILSIQS SFAADKLATI ELQIKTAKGA QNKQTKQQKL 
LEKLVANAEK ETAIATLKVQ QTKETIQLEN SRLKQLIEQT AILEEDKIKQ QKLLEQQLIS
SYMTGQTDLI KLILNQEDIS KIIRAKSYYQ YLNKARLESI NALYETQQQL ENNKSAQADS
LLALTGLYER QKVSAEALLE QRAERSKALK ELNQDLNYQY ALLAQLGDQA QNLKEKLRKQ
SEARQKRELA AKAKAKAKAL KNRQSKSEEK TNSNIAKGKE ETYSNIAKQL GQLNWPIQGE
VLSRFGSQRS GQVTWKGITI EANEGEKVQA VASGRVLFAG YFKGYGMVLA LDHSDGYISL
YGYNQTLLQE TGDLVLQGDT IALAGHSGGQ DNNSLYFELS HKGTAKDPLL WLKKKHN