Gene Ping_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3197 
Symbol 
ID4624806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3950949 
End bp3952865 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content40% 
IMG OID639798304 
ProductABC transporter ATP-binding protein 
Protein accessionYP_944483 
Protein GI119946803 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.79023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0446478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTGG CTAGTAATAT TGAATTAATT CGCGGCGGTA AACCTTTACT TGTAAATGCC 
AGCGCAACAA TCAACCCACA CCAAAAAGTC GGATTAGTCG GTGCTAATGG CTGTGGTAAA
TCAAGTTTTT TTGCACTTTT AAAGCAAGAA GCACAGATTG ATAATGGCGA GCTGAGTATT
CCACAGCATT GGCGTATGGC AAGTGTCGCT CAAGAAACCC CTGCGCTCGA TATGAATGCG
TTACAGTACG TTATTGACGG GGATTATGAT TTCAGATTGT TACAGCAGCA ACTTAAAGAA
GCAGAGGCCG CTGATAACGG CAATAAAATA GCTGAACTGC ATGGTAAATT AGACCATGCG
GGAAGTTATA CCATTGAATC CCGTGCCGCT GAATTACTCG CCGGTTTAGG CTTTCCAGAG
CCGGATCAAA GTCGCTCAGT AAGTGATTTT TCGGGTGGTT GGCGTATGCG TTTAAATTTA
GCACAAGCGC TACTTTGCCC TTCTGACTTA TTATTACTTG ATGAACCAAC CAATCACCTT
GATTTAGATG CAGTCATTTG GCTTGAAAAA TGGTTACGTC AATATGCAGG CACATTAATC
TTAATATCAC ATGACCGTGA CTTTATTGAT ACTATCGTTG ATAAAATAAT ACATATAGAG
CAGCAGCAAC TTCATGAATA TACGGGTAAC TACAGCAGTT TCGAACGTCA ACGGGCTGAA
AAGTTAGCAC AGCAGCAATC CTCTTTTGAA AAGCAGCAAA CGCAAATGAG TCATATGCAG
GATTATATTG ACCGTTTTCG TTATAAAGCC AGCAAAGCGA AACAAGCACA AAGTCGTATT
AAAGCATTAG AAAAAATGGA GCAATTATTA CCTGCACATT TGGATAATCA ATTTAGCTTT
TCCTTTAGAG AGCCGGATTC CTTGCCGATG CCGTTATTAA CCTTAGAAAA AGTGAGTGCA
GGTTATGACG ATTTATTGAT TCTTGATAAA ATAGAATTAA ATCTTGCGCC CGGCAGTCGA
ATCGGTTTAT TGGGCCGCAA TGGTGCAGGT AAATCAACGC TTATTAAACT CATATCAAAC
CAAATTAAAC CTATCTCGGG TAAATTGGAG ATCAATCCAA AGGCTAAAAT TGGTTACTTT
GCCCAGCATC AATTAGAGCT TTTATCTCTG GATGAAACAC CACTTCAACA TCTTGCCCGG
TTTGCACATG ATGAAAAAGA AGTCACCTTA CGAAATTTTT TGGGCACTTT TGGTTTTCAA
GGGGATAAGG CGTTAGATAA AGTCAGGCCA TTTTCGGGGG GAGAAAAAGC GCGTTTAGTG
TTGGCCCTGT TGGTGTGGCA AAAACCCAAC CTGTTATTAC TTGATGAACC GACCAACCAC
CTTGATTTGG AAATGCGCCA TGCACTCACA ATGGCACTGC AAGAGTTTGA AGGTGCAATG
GTAATAGTCT CGCATGACCG TCATTTGTTA CGCACCACAA CCGATGATTT ATATTTAGTG
CATGATCATA AAGTAGAGCC TTTTGTTGGT GACCTTGATG ATTACCATAA ATGGTTATCA
GAACAACAAC GTATTGAAAA ACAACCAGTT CAAGACCTTG AAAGTGTTAA CTCATCGACT
GTTAATCGTA AAGAACAAAA ACATTTAGAA GCTGAATTTC GTAAAAAATT AACACCTTAT
AAAAAGCAGT TAAGCAGTTC AGAAAAGTTA ATGGAAAAAT TGAGTCAACA ATTAGAAGAG
ATAGAGAAGC AACTGGCAGA TCCTGCACTA TATGAACACG CACAAAAGGC ACGCTTAACT
GAGTTATTAA AGCAGCAGGG CGAGTTAAAA GAGTCACTCG AAGAAGCGGA AATGGCTTGG
ATGGATGCAC AGGAAAAAAT TGAATTAATG GAAGCTGAAT TTGAAGAGGT CATTTAA
 
Protein sequence
MIVASNIELI RGGKPLLVNA SATINPHQKV GLVGANGCGK SSFFALLKQE AQIDNGELSI 
PQHWRMASVA QETPALDMNA LQYVIDGDYD FRLLQQQLKE AEAADNGNKI AELHGKLDHA
GSYTIESRAA ELLAGLGFPE PDQSRSVSDF SGGWRMRLNL AQALLCPSDL LLLDEPTNHL
DLDAVIWLEK WLRQYAGTLI LISHDRDFID TIVDKIIHIE QQQLHEYTGN YSSFERQRAE
KLAQQQSSFE KQQTQMSHMQ DYIDRFRYKA SKAKQAQSRI KALEKMEQLL PAHLDNQFSF
SFREPDSLPM PLLTLEKVSA GYDDLLILDK IELNLAPGSR IGLLGRNGAG KSTLIKLISN
QIKPISGKLE INPKAKIGYF AQHQLELLSL DETPLQHLAR FAHDEKEVTL RNFLGTFGFQ
GDKALDKVRP FSGGEKARLV LALLVWQKPN LLLLDEPTNH LDLEMRHALT MALQEFEGAM
VIVSHDRHLL RTTTDDLYLV HDHKVEPFVG DLDDYHKWLS EQQRIEKQPV QDLESVNSST
VNRKEQKHLE AEFRKKLTPY KKQLSSSEKL MEKLSQQLEE IEKQLADPAL YEHAQKARLT
ELLKQQGELK ESLEEAEMAW MDAQEKIELM EAEFEEVI