Gene Ping_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3161 
Symbol 
ID4626891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3892530 
End bp3893288 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content43% 
IMG OID639798265 
ProductHAD family hydrolase 
Protein accessionYP_944448 
Protein GI119946768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGG CTATTTTTGA TCTGGATGAA ACCTTAGTTT GCGGTGACAG TTGCTCTCTT 
TTTTGCCAGT TTATGCAGGC TGAAGGTCTG GTTGGCCCTG AGTTTGTTGA ACGTGACAAG
CGCATGATGG GTTTATACAA CGCTGAAAAA TTGGTGCTCG ATGATTATAT TGAATTTTTT
ATTGAGCCAC TGAGCCATTT AAGCATCACA GCTATTGACG GAATAATGCC ACGTTTTGTT
GAGCAGTATA TTGCTCCGCG AATTTATGCC GAAGCCCAGC AGGTTTTGAA GAGTCAAGCC
GCACAGGGAA AGCGCTTACT GATTATTTCA GCCACAGCTG AATTCATTGT CAGTGCGGTT
GCACGATACT TAGGCGTAGC CGATGTTTTA GCTATTCGTC TCTCCAGTAA AGAGGGATAT
TACACAGGTA AAATAGAAGG CGTACCAACC TTTAGACAAG GCAAGGTTAC CCGCTTGCAT
AATTGGTTAA TCGAGCAAAA TGAAAACCTG ATCGATGCCC AGTTTTACAG TGACTCTATT
AATGATCTTC CCCTGCTAGC CTTGGTTGAT TACCCCATTG CAACCAATCC TGATACGCAA
CTGACACAGA TTGCAGCGCA GCGACATTGG CCTGTTCTGA ACTGGTCTGC TTTTAATCCG
TTAATTGCAC AAACCAGCAT CTCTGCACCT CAACCTAATA AATTATTTAA CGAACAATCT
GTTCGACATT TTACCCCTAA GGAAATAACT CATGTCTAA
 
Protein sequence
MALAIFDLDE TLVCGDSCSL FCQFMQAEGL VGPEFVERDK RMMGLYNAEK LVLDDYIEFF 
IEPLSHLSIT AIDGIMPRFV EQYIAPRIYA EAQQVLKSQA AQGKRLLIIS ATAEFIVSAV
ARYLGVADVL AIRLSSKEGY YTGKIEGVPT FRQGKVTRLH NWLIEQNENL IDAQFYSDSI
NDLPLLALVD YPIATNPDTQ LTQIAAQRHW PVLNWSAFNP LIAQTSISAP QPNKLFNEQS
VRHFTPKEIT HV