Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3149 |
Symbol | |
ID | 4626879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3876128 |
End bp | 3876733 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639798253 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_944436 |
Protein GI | 119946756 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0190342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTTAAAAC TTGAGAAGCT ATTTGATAAA TTTGCAGATG GTATTGGAAT CATTACATCT ATTGCTATGG TGTTAATGAT TCTAAATGTA TTTTATGATG TTATTACAAG GTATGTTTTT AATACAAGCA GTATTGGCAT GCAGGAGATG GAGTGGCATC TTTTTTCAGT TATCATCTTG CTGGGCGTGG CTTATACGCT AAAAGATGAT GGACATGTCA GGGTTGATAT CATTTATGAT AATCTTTCAT ATAGAAAGAA AGCGATGATA AATATGCTTG GCGCTATTTT CTTTATCTTA CCTATCTCGC TGCTGGTTGG CATCAGTTCG ATTGACAATG CTGTTTCCGC TTATGCTTCC ATGGAACAAA GTGGTAACCC CGGTGGATTA CAATATAGAT GGATTGTCAA AGCATTAATT CCACTTTCAT TTCTTTTATT AATTATTACA TCGGTAGGTT TTTTTATAAA AAATTTAAAT GTATACAATG GATTGCACCC CTTAGAAATG GATAGAATCA GACACGAAGC TGAAGATATT AAGCATGATC TTGATGAACA TAAGCACCAC ATTGTAGATA TTGATGAAAA AGGAGAGTCA AAATGA
|
Protein sequence | MLKLEKLFDK FADGIGIITS IAMVLMILNV FYDVITRYVF NTSSIGMQEM EWHLFSVIIL LGVAYTLKDD GHVRVDIIYD NLSYRKKAMI NMLGAIFFIL PISLLVGISS IDNAVSAYAS MEQSGNPGGL QYRWIVKALI PLSFLLLIIT SVGFFIKNLN VYNGLHPLEM DRIRHEAEDI KHDLDEHKHH IVDIDEKGES K
|
| |