Gene Ping_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3127 
Symbol 
ID4626138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3849380 
End bp3850414 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content40% 
IMG OID639798238 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_944421 
Protein GI119946741 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAT CTAATATCAT TGGAATCGAT TTAGCTAAAA ATATTCTTCA AATTTGCCAT 
ATCAGTAAAC ACGGTGAACT AATCAGTAAT AAAGCAGTTA GCCGACAAAA ACTAAAACAG
ATCCTAGCGA ATCAGCAACC TGCGGTTGTT GCTATTGAAG GCTGTGGTAG CAGTCATTAT
TGGGGGAGAT ATGCAGAAGA ATTTGGTCAT GATGTACGGA TCATTAGCCC TAAGAAAGTG
AAAGGGTTTT TACAAGGGCA TAAAACGGAT GCTAACGATG CTTTGGCCAT TGCAAACGCA
TCGCTACAGA TAGGATTAAA AACAAGCAAA CCCAAAAATG AAGAACAGCA AACCTTACAA
ACATTAGAAA CCAGCCAGCT TTTTTTGTCT CGTGGCATTA CATCTTTGAG CAACCATCTC
CGAGCATTGT TATATGAATA TGGCATTGTC AGTACTGTCG GTGTCAAAGG ATTAACTAAG
GCCGTGCTGG AGACGCTTGA TGAAGCAAGC TTATTACCAG AGTGTTTACG GTCAACCGTC
AATCAACTTT GGATAATATA TTTAAACTTA AAAACAGAGT TAGCCCAGTT AATAAAAACC
AAAAATGGTC TGGTTCGTCA ATTACAGCCC TGTAAAGCAT TAATGGGTTT AGAAAGTGTT
GCTGAAGTAT GTGCAGGTAT GCTGTATTCA TCAATTGGTG ATGGGAAGCA GTTTAAAAAT
GGGCGGGAGG CATCAGCGTT TATCGGGTTA ACACCTAAGC AACATAGCTC AGGTGGTAAA
GTATTTATGA CAGGAATTGA TCGAGCTGGC GGAATTAAAG AATTGAGATC GGCTTTATAC
CAAGGCGCAC TGTCTTATAT ATGCCGATTG GCGGATGAAC CCAAAACGGC CAAACAAGCA
TGGTTGATAA AACTGGTTCA ACGCGCGGGT ATTAAACGAT CCTGTATTGC TTTAGCGAAC
AAAACAGTTA GAACCGCCTG GGCAATGCTA CGGTATGAGA ATAAATATAA GCAACAACCA
CTATTGGCAA TATAA
 
Protein sequence
MLQSNIIGID LAKNILQICH ISKHGELISN KAVSRQKLKQ ILANQQPAVV AIEGCGSSHY 
WGRYAEEFGH DVRIISPKKV KGFLQGHKTD ANDALAIANA SLQIGLKTSK PKNEEQQTLQ
TLETSQLFLS RGITSLSNHL RALLYEYGIV STVGVKGLTK AVLETLDEAS LLPECLRSTV
NQLWIIYLNL KTELAQLIKT KNGLVRQLQP CKALMGLESV AEVCAGMLYS SIGDGKQFKN
GREASAFIGL TPKQHSSGGK VFMTGIDRAG GIKELRSALY QGALSYICRL ADEPKTAKQA
WLIKLVQRAG IKRSCIALAN KTVRTAWAML RYENKYKQQP LLAI