Gene Ping_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3121 
Symbol 
ID4625913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3842915 
End bp3843364 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content40% 
IMG OID639798234 
Product3-dehydroquinate dehydratase, type II 
Protein accessionYP_944417 
Protein GI119946737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC AAATAAAGTT ATTAGTTTTA AATGGGCCTA ACCTTAATTT ATTAGGGCAA 
CGTGAACCCG AGGTCTACGG CAGTAAGACG CTTGATGACA TCATTAAAGC GTTAACCGAT
GAAGCTGCGC TGCAGAATGT TGCATTATCA CACCTGCAAT CAAACCGTGA ATACGAGCTG
ATTGAAAAAA TCCACGACGC CTTTGAGAAA ATTGATTTTA TTATTATTAA TCCGGCGGCA
TTTACGCATA CGAGTGTTGC GCTTCGTGAT GCGCTATTAG GGGTTAATAT TCCTTTTATA
GAAGTACACC TTTCCAACGT ACATGCACGT GAAAGTTTTC GTCATCACTC ATACTTATCT
GATATTGCAC AGGGTGTTAT TTGTGGTTTA GGCGCAAAAG GTTACTCTTT TGCCCTGCAG
AGCGCGATTG GTAAATTACG CAATATTTGA
 
Protein sequence
MTQQIKLLVL NGPNLNLLGQ REPEVYGSKT LDDIIKALTD EAALQNVALS HLQSNREYEL 
IEKIHDAFEK IDFIIINPAA FTHTSVALRD ALLGVNIPFI EVHLSNVHAR ESFRHHSYLS
DIAQGVICGL GAKGYSFALQ SAIGKLRNI