Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3052 |
Symbol | |
ID | 4626063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3750035 |
End bp | 3750805 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798168 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_944351 |
Protein GI | 119946671 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0431176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAA ATTTAGTTCC TTCTGTTTGT ATTGATGCGG TTTTTAGTGG TCAATCTTTC GATCAGGCTT GTGCACAGGT TAAAGATGCT AATATCAGTC ATATCGAATT TTGGGGCTGG TGGGACAAAG ATCTTGATAG CTTACAAGCA GCGCAGCATA AACAGGGTTT AACAATAGCG GCTTGTTGTA CCAAATTTAT CAGTTTAGTT GAGCCTGCAC TGCGTGATAA TTATTTACAG GGACTGCAGG AATCGATTCA AGCGGCGCAG AAACTGGGCA TTAAAATATT GATATCGCAG GTTGGTGATT TTATTGAATC TAGATCGCGA GCGGAGCAGC AACAATCAAT TATAAATGGC TTAAAAGCCG CCGCGCCTTT ATTAGAAGCG GCAGATATAA CCCTAGTAAT AGAGCCGCTT AATGAACGGG TTGATCATGC CGGTTATTTC CTGGTTCGCA GTGATCAGGC TTTTGATATT GTTAAACAAG TCGCAAGCCC AAAGGTAAAA GTATTATTTG ATATTTATCA TCAGCAGATA AGTGAAGGTA ATGTTATCCG TAATATTGTC GATAATATTG ATTATATCGG CCACTTCCAT GCGGCAGGTA ATCCGGGTAG AAATGAACTA CAACGTGGCG AAATTAATTA TCCACAGGTA TTTTCCGCCA TTCAAAAAAC AAACTTTATC GGGCATGTCG GCCTTGAATA TTGGCCAACG AACGATCAGC CGGTTGCGGC GCTGCGCGAC GTTGCCACCT GGTTAATTTA A
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Protein sequence | MRKNLVPSVC IDAVFSGQSF DQACAQVKDA NISHIEFWGW WDKDLDSLQA AQHKQGLTIA ACCTKFISLV EPALRDNYLQ GLQESIQAAQ KLGIKILISQ VGDFIESRSR AEQQQSIING LKAAAPLLEA ADITLVIEPL NERVDHAGYF LVRSDQAFDI VKQVASPKVK VLFDIYHQQI SEGNVIRNIV DNIDYIGHFH AAGNPGRNEL QRGEINYPQV FSAIQKTNFI GHVGLEYWPT NDQPVAALRD VATWLI
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