Gene Ping_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3052 
Symbol 
ID4626063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3750035 
End bp3750805 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content42% 
IMG OID639798168 
Productxylose isomerase domain-containing protein 
Protein accessionYP_944351 
Protein GI119946671 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0431176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA ATTTAGTTCC TTCTGTTTGT ATTGATGCGG TTTTTAGTGG TCAATCTTTC 
GATCAGGCTT GTGCACAGGT TAAAGATGCT AATATCAGTC ATATCGAATT TTGGGGCTGG
TGGGACAAAG ATCTTGATAG CTTACAAGCA GCGCAGCATA AACAGGGTTT AACAATAGCG
GCTTGTTGTA CCAAATTTAT CAGTTTAGTT GAGCCTGCAC TGCGTGATAA TTATTTACAG
GGACTGCAGG AATCGATTCA AGCGGCGCAG AAACTGGGCA TTAAAATATT GATATCGCAG
GTTGGTGATT TTATTGAATC TAGATCGCGA GCGGAGCAGC AACAATCAAT TATAAATGGC
TTAAAAGCCG CCGCGCCTTT ATTAGAAGCG GCAGATATAA CCCTAGTAAT AGAGCCGCTT
AATGAACGGG TTGATCATGC CGGTTATTTC CTGGTTCGCA GTGATCAGGC TTTTGATATT
GTTAAACAAG TCGCAAGCCC AAAGGTAAAA GTATTATTTG ATATTTATCA TCAGCAGATA
AGTGAAGGTA ATGTTATCCG TAATATTGTC GATAATATTG ATTATATCGG CCACTTCCAT
GCGGCAGGTA ATCCGGGTAG AAATGAACTA CAACGTGGCG AAATTAATTA TCCACAGGTA
TTTTCCGCCA TTCAAAAAAC AAACTTTATC GGGCATGTCG GCCTTGAATA TTGGCCAACG
AACGATCAGC CGGTTGCGGC GCTGCGCGAC GTTGCCACCT GGTTAATTTA A
 
Protein sequence
MRKNLVPSVC IDAVFSGQSF DQACAQVKDA NISHIEFWGW WDKDLDSLQA AQHKQGLTIA 
ACCTKFISLV EPALRDNYLQ GLQESIQAAQ KLGIKILISQ VGDFIESRSR AEQQQSIING
LKAAAPLLEA ADITLVIEPL NERVDHAGYF LVRSDQAFDI VKQVASPKVK VLFDIYHQQI
SEGNVIRNIV DNIDYIGHFH AAGNPGRNEL QRGEINYPQV FSAIQKTNFI GHVGLEYWPT
NDQPVAALRD VATWLI