| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3013 |
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| Symbol | rpsA |
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| ID | 4623797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3712394 |
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| End bp | 3714064 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639798131 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_944314 |
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| Protein GI | 119946634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000348916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAT CTTTTGCTGA ACTATTTGAA GAATCTCTAC AAACGGTAGA AACTCGTCCC
GGTACGATTG TTAAAGGTAC AATCGTAGGA ATCCGTAACA ACCTAGTATT TGTTGATGCA
GGTCTTAAAT CTGAAGCTGC AATCCCAGTT GAAGAATTTA AAAATGCTGC TGGTGAACTA
GAAGTTGCTG TTGGCGATGT TGTCGATGTA GCGTTAGACG CGGTAGAGGA CGGTTTCGGT
GAAACTAAAC TTTCTCGTGA AAAAGCGAAA CGTCACGAAG CTTGGATCCA GCTAGAGAAA
GCGTACGAAG ACCAAGAAAC TGTTATCGGT GTTATCAACG GTAAAGTTAA AGGTGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCTTTC CTACCAGGAT CATTAGTTGA CGTACGTCCG
GTACGTGACA CTGCTCACCT TGAAAACAAA GATATTGAAT TCAAAGTGAT TAAACTTGAT
CAAAAACGTA ACAACGTTGT TGTATCTCGC CGTGCTGTTA TCGAAACTGA AAACAGTGTT
GAACGCGATG AACTACTTGA AAACCTTCAA GAAGGTCAAG AAATTAAAGG TATCGTTAAG
AACTTAACCG ACTACGGCGC ATTCGTAGAT CTAGGTGGTG TTGACGGTCT ATTACACATT
ACCGATATGG CTTGGAAGCG TGTTAAACAC CCAAGTGAAA TCGTCAATGT TGGTGATGAA
ATCAATGTTA AAGTGCTTAA ATTTGATCGT GAGCGTACTC GTGTATCGCT AGGTCTTAAG
CAACTTGGTG AAGATCCATG GGTAGCAATC GCTAAACGTT ACCCTGAAGG CACTCGCTTA
ACGGGTAAAG TGACTAACTT AACTGACTAC GGTTGTTTTG TTGAGATTGA AGAAGGCGTT
GAAGGTTTAG TTCACGTTTC AGAAATGGAT TGGACTAACA AAAACATTCA CCCGTCTAAA
GTTGTTAACC TTGGTGATGC AGCTGAAGTT ATGGTACTGG ATATCGATGA AGAACGTCGT
CGTATCTCTC TAGGCCTTAA ACAGTGTAAA GCTAATCCAT GGGAAGAGTT CTCTTCAACT
CATGATAAAG GTCAAAAAGT TTCTGGTAAG ATTAAATCTA TCACTGACTT TGGTATCTTC
ATCGGTCTTG ATGGCAACAT CGATGGTCTA GTTCACCTTT CTGATATTAG TTGGGAAGCT
GAAGGCGAAA AAGCTGTTCT AGATTACAAA AAAGGCGATG AGATCGAAGC TGTTGTGCTT
CAAGTTGATC CTGAGCGTGA GCGTATCTCT TTGGGTATCA AGCAAATTTC AATTGACCCG
TTCAATAATT ACTTAGCAGA AAACAAGAAA GGGTCTATTG TTGTAGGGAC TATCTCTGAA
GTTGATGCTA AAGGTGCAAC TATTACTCTT GCTGAAGGCG TTGAAGGTTA CATTCGTGTA
GGTGATATCG CACGTGAGCG TGTTGAGAAT GCAGCTACAG TGCTTAAAGC TGGTGACGCT
ATTGATGCTA AATTTGTCGG TGTAGATCGT AAAAACCGTG TAATTAGCCT TTCTATCAAA
GCTAAAGATG AAGCTGATGA GAAAGAAGCT GTTGATAGCT TAAAACAACA AGATGAAGCA
AGCATGGGTA ATGCAATGCT TGATGCATTT AACGCAGCTA AAGGCAAATA A
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| Protein sequence | MMESFAELFE ESLQTVETRP GTIVKGTIVG IRNNLVFVDA GLKSEAAIPV EEFKNAAGEL
EVAVGDVVDV ALDAVEDGFG ETKLSREKAK RHEAWIQLEK AYEDQETVIG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLENK DIEFKVIKLD QKRNNVVVSR RAVIETENSV
ERDELLENLQ EGQEIKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTRL TGKVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDAAEV MVLDIDEERR RISLGLKQCK ANPWEEFSST
HDKGQKVSGK IKSITDFGIF IGLDGNIDGL VHLSDISWEA EGEKAVLDYK KGDEIEAVVL
QVDPERERIS LGIKQISIDP FNNYLAENKK GSIVVGTISE VDAKGATITL AEGVEGYIRV
GDIARERVEN AATVLKAGDA IDAKFVGVDR KNRVISLSIK AKDEADEKEA VDSLKQQDEA
SMGNAMLDAF NAAKGK
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