Gene Ping_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3001 
Symbol 
ID4623692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3697785 
End bp3699047 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content40% 
IMG OID639798119 
Productmetal dependent phosphohydrolase 
Protein accessionYP_944302 
Protein GI119946622 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT TCAAACAAAA AGCGGCTATA CGGATTGGCT GCGCAAGCCT GATATTGGCG 
ATTATCTCCA GTGTTTTTGC CTGGTATATT TCTAAGGAAA ACTTTGAAAA AAGTATTATT
TCTTTGGCTT ATGAAGAATC ACACCGGTTA ATCATGCATC ACAAGTCTAT TGATCAAAAA
AGTGATAATG GAGAAACAGT TATTCAGCAA GGCGTGCAAA CGTTAACGGG GGGATTGTTT
GATATTGCTG AAATATATGA TGTGAATGGC AAAAAGCTGG CTGAATCATT AACAGCTGAA
GGCAAAAAAA TAGAAGATCA ACTTCCAGAG CATGTCTTCC TCAATACAAA TAAATCTGAA
TATGAAAGTG TTACTTTAGC CAATGGAGAA TGGGTTTTAA CTGTATTTGT TCCTTTGCAT
TCATTAACAG AAACAAAACT CAATACCGAT TTGGGTTATT TAGAAGGGGT GAGAATTGTT
CCCGAATGGC AAAAAAAACA GATCTTCCAA AATTCTTTTA TTGTATCAAT GCTTGTCAGT
CTTGCAGCCT TATTGTGCGG AATGATCATC TATCCAATCG TTGTAAGCCT GTCCAAGGAA
AATGAAAATA AAACACTAGA GATACTAAAC TCGCACATTG CAATGATGGA ATCTTTGGGC
CGCGCGATCG CAAAGCGGGA TTCTGATACG GGTGCTCATA ATTATCGTGT CGCCTGGATA
GCGGCAAAGC TTGGTGAAGA AGTGGGTTTA TCTGGAGGTA AAATGCAGTC TTTGATTGCC
GGAAGCTTCC TGCATGATGT CGGAAAAATT GGTATCCCCG ATGCGATTTT ATTAAAGCCG
GGTAAACTTT CAGAGTCAGA ATTTGCAGTG ATACGTACTC ATGTTCAACA AGGCGAAGAA
ATCGTCATGG GGATGGGCTG GTTAGATGGC GCTAATGAAG TCGTTTCGGC TCATCATGAA
AAGTGGGATG GCAGCGGCTA TCCTAGAGCA TTAAAACATG AAGAAATCCC TTTATCAGCA
CGCATTTTTG CAATAGCGGA TGTCTTTGAT GCCCTTTCTT CAAAACGCCC CTATAAAGAG
CCGATGCCTT ACGAAAAGGT GATGGATATT CTTAAGAAAG ATACAGGCTC TCATTTTGAC
GCAACGCTAA TGCGCCTTTT TGTTCCCATG TCCAAAGGTA TCTCAGAGAA ATTAAATGGC
TTAAATGAAG ATAAGGTGCG AGAACTACTT GAAGAGCGGG TACGTCAGCA TTTCTATACC
TGA
 
Protein sequence
MTNFKQKAAI RIGCASLILA IISSVFAWYI SKENFEKSII SLAYEESHRL IMHHKSIDQK 
SDNGETVIQQ GVQTLTGGLF DIAEIYDVNG KKLAESLTAE GKKIEDQLPE HVFLNTNKSE
YESVTLANGE WVLTVFVPLH SLTETKLNTD LGYLEGVRIV PEWQKKQIFQ NSFIVSMLVS
LAALLCGMII YPIVVSLSKE NENKTLEILN SHIAMMESLG RAIAKRDSDT GAHNYRVAWI
AAKLGEEVGL SGGKMQSLIA GSFLHDVGKI GIPDAILLKP GKLSESEFAV IRTHVQQGEE
IVMGMGWLDG ANEVVSAHHE KWDGSGYPRA LKHEEIPLSA RIFAIADVFD ALSSKRPYKE
PMPYEKVMDI LKKDTGSHFD ATLMRLFVPM SKGISEKLNG LNEDKVRELL EERVRQHFYT