Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2956 |
Symbol | |
ID | 4623472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3643447 |
End bp | 3645411 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798074 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_944257 |
Protein GI | 119946577 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.356807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.100111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTTAATG ATCTGTTATT ATTACTCTTT TTTGCAATTG TCAGCGTACT TATCTTTAAA CGCCTGAGAT TGTCGAATAT TGTCGCCTAC CTCTTTACCG GATTTGTGCT GGGTCCCTCG CTGTTTAATC TTCTTAACTC TTATCATGAA ATAGAGCTGG TTGCCGAGTT TGGTATCGTT TTTTTAATGT TTTCACTCGG ATTGGAGTTT TCATTAAACA AATTGATTAA AATGAGTCGG GCTGTTTTTG GCATTGGGGC ACTGCAGGTA TGTGCTTCAT TTTTTCTGTT CTATTGGTTA TGCCAATTAT TTGATCTGAA CTGGCAGCAG GCATTTACCG TTGCTGCGGT CTTAACCATG TCGTCAACGG CCATTATTGT TAAAGTATTA AGCGATCAGC AGAGGTTACA ATCAAGAATT GGTCGACTGG CAATCTCCAT TCTTCTTTTT CAAGATCTTG CCGTGGTCCC CTTCTTAATT ATTATTCCTA TTATTGCAAT GCCGGGGCTT GAAGGCGATA TCGTGACCGC TTTGTTGCTT GCCTTTGTAA AAGGGGCGTT AGCTGTCGCT GTTATCTTAT CCGTTGGGCG CTGGTTACTG CCAATGTTTT TTGATGAAAT GGCGAGTATG CGTTTTGATG AGATTTTTAT TCTATCAACG CTGTTTGTCA CTATCTTAGC CGCCTGGTTT ACGCAATTAT TGGGTCTATC TATGGCATTA GGGGCTTTTT TGGCGGGTAT GATGCTTAGC GAAAGTCATT ACCGCCATCA ACTTTTGGCC GATATTAGGC CATTTAAAGA TATTTTGATG GCCATTTTTT TTATCTCAAT TGGTACGCTT TTACAGTATC AGGTGTTACT CGATGATTTT GGCATATTAA TTTTAATCGT AATAGGTGTG ATGCTGGCAA AAATCTTAAC CATCACCTTA GCGGCCGTTA TTATGCAAGA GAAATTATCA ACAGCGCTGG GAACCGGTAT TGCTTTAGCA CAAATGGGTG AGTTTGGTTT TATATTGGTC GCATTGGCAA GTAAATATAA ATTATTAGAC GCGCAGTTAT CCTCTCTGAT TATTGCAACA GGAGTAATTA GCATGACGCT GACGCCCTTA TTGGTAAAAT ACAGCAGTTA TATCTCACGC GAATTATTAC ACCATTCGGC CAACGCTTTT CGTTTTCAAA AAACTTTGCC CGGGCAATTT ACAAAACATA CCATTATTTG TGGTTATGGA CGTGTCGGGC AAATTGTTTC ACGGTTTTTA AAAAATGAAT CGCTGCCCTT TATTGTTTTG GACAGAGATC CTATGCGGGT TAAAGAAGCT AGGGAAGGAG GGGAACTCAT TGAGTTTGGC GATGCGAGCC GCAGGGAAAT ATTGTTACTT GCCGGTATTG AAAAAGCCAA TTTATTAATT ATCACTTTTG ATGACCTGCG GCGTTCAATG GCTTTATTAG GGCTGATTAG GGTGCTAAAT CCAAGCCTGA AAGTGCTAGT GCGCACCAAG GATGATAAGG GTCTGGATCT GTTAAAAGAG GCGGGTGCTA CCGAGGTTAT CCCCGAGGTA TTAGAGGGCA GTTTGATGTT GGTTGCCCAT GTTTTGTTTT TATCGGGCGT ACCAAGTAGG CGAATTTTGC AGCGTTTAGA GAGTGAACGC AACATTAAGT ACCAACATCT GCATGGTTTT TATTATGGAC AAAATAGCCG AAGTGAAAAA AATGCATGGC ATATAGAACA GTTACATGCG GTAACTTTAA CTGAAGAGGC TGAGGTAGTG GGCAGTTGTG TGCAGGAATT TCACCTTGCC GGCGTTATAA TAAAATCTCT GCATCGGGAA AATGGAGCAG AGGTGCTCAT TTCAGAAAAA GTACTTTTTG AACCGGGTGA TCTGGTTTTG CTGCAGGGCG ATAAAGACAG GTTACAACTT GCTGAGAAAA TTTTGCTTGG AAAGTGTTAC TATGTTCCTG TTTAA
|
Protein sequence | MLNDLLLLLF FAIVSVLIFK RLRLSNIVAY LFTGFVLGPS LFNLLNSYHE IELVAEFGIV FLMFSLGLEF SLNKLIKMSR AVFGIGALQV CASFFLFYWL CQLFDLNWQQ AFTVAAVLTM SSTAIIVKVL SDQQRLQSRI GRLAISILLF QDLAVVPFLI IIPIIAMPGL EGDIVTALLL AFVKGALAVA VILSVGRWLL PMFFDEMASM RFDEIFILST LFVTILAAWF TQLLGLSMAL GAFLAGMMLS ESHYRHQLLA DIRPFKDILM AIFFISIGTL LQYQVLLDDF GILILIVIGV MLAKILTITL AAVIMQEKLS TALGTGIALA QMGEFGFILV ALASKYKLLD AQLSSLIIAT GVISMTLTPL LVKYSSYISR ELLHHSANAF RFQKTLPGQF TKHTIICGYG RVGQIVSRFL KNESLPFIVL DRDPMRVKEA REGGELIEFG DASRREILLL AGIEKANLLI ITFDDLRRSM ALLGLIRVLN PSLKVLVRTK DDKGLDLLKE AGATEVIPEV LEGSLMLVAH VLFLSGVPSR RILQRLESER NIKYQHLHGF YYGQNSRSEK NAWHIEQLHA VTLTEEAEVV GSCVQEFHLA GVIIKSLHRE NGAEVLISEK VLFEPGDLVL LQGDKDRLQL AEKILLGKCY YVPV
|
| |